Evidence map›Paper›PMID 27169424›Full record

ArticleMolecular biology reports2016

Epigenetics and cortical spreading depression: changes of DNA methylation level at retrotransposon sequences.

Denise Drongitis, Sara Rainone, Marina Piscopo, Emanuela Viggiano, Alessandro Viggiano, Bruno De Luca, Laura Fucci, Aldo Donizetti

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Article in Molecular biology reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.3field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Denise DrongitisDepartment of Biology, University of Naples Federico II, via Cinthia, 80126, Naples, Italy.
Sara RainoneDepartment of Biology, University of Naples Federico II, via Cinthia, 80126, Naples, Italy.
Marina PiscopoDepartment of Biology, University of Naples Federico II, via Cinthia, 80126, Naples, Italy.
Emanuela ViggianoDepartment of Experimental Medicine - Section of Human Physiology, Second University of Naples, Via De Crecchio 8, 80138, Naples, Italy.
Alessandro ViggianoDepartment of Experimental Medicine - Section of Human Physiology, Second University of Naples, Via De Crecchio 8, 80138, Naples, Italy.
Bruno De LucaDepartment of Experimental Medicine - Section of Human Physiology, Second University of Naples, Via De Crecchio 8, 80138, Naples, Italy.
Laura FucciDepartment of Biology, University of Naples Federico II, via Cinthia, 80126, Naples, Italy.
Aldo DonizettiDepartment of Biology, University of Naples Federico II, via Cinthia, 80126, Naples, Italy. aldo.donizetti@unina.it.
University of Naples Federico II · ITUniversity of Campania "Luigi Vanvitelli" · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cortical spreading depression (CSD) is an evolutionarily conserved phenomenon that involves a slow and self-propagating depolarization wave associated with spontaneous depression of electrical neuronal activity. CSD plays a central role in the pathophysiology of several brain diseases and is considered to be able to promote "Preconditioning". This phenomenon consists of the brain protecting itself against future injury by adaptation. Understanding of the molecular mechanisms underlying Preconditioning has significant clinical implications. We have already proposed that the long-lasting effects of CSD could be related to silencing of retrotransposon sequences by histone methylation. We analyzed DNA methylation of two retrotransposon sequences, LINE1 and L1, and their corresponding expression pattern after CSD induction. Based on immunoprecipitation assay of the methylated DNA (meDIP), we demonstrated hypermethylation of both sequences in preconditioned rat brain cortex compared with a control 24 h after CSD induction. Using quantitative PCR, we also showed that CSD induction caused a decrease of the transcript level of both retrotransposon sequences. Our data are consistent with the hypothesis of epigenetic modifications in Preconditioning-dependent neuroprotection by increasing genome stability via the silencing of retrotransposon sequences.

Indexed as

Cortical Spreading DepressionEpigenesis, GeneticLong Interspersed Nucleotide ElementsAnimalsDNA MethylationHypoxia-Inducible Factor 1, alpha SubunitMaleNitric Oxide Synthase Type IIProtective FactorsRats, WistarHif1a protein, ratHypoxia-Inducible Factor 1, alpha SubunitNitric Oxide Synthase Type IINos2 protein, ratCortical spreading depressionDNA methylationNeuroprotectionNeuroprotective genesPreconditioningRetrotransposon sequences

Identifiers

PMID27169424
OpenAlexW2359113942

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.