Evidence map›Paper›PMID 27168165›Full record

ArticleMicrobiologyOpen2016

Zinc coordination is essential for the function and activity of the type II secretion ATPase EpsE.

Chelsea S Rule, Marcella Patrick, Jodi L Camberg, Natalie Maricic, Wim G Hol, Maria Sandkvist

Open access · goldAbstract read
In one paragraph

Article in MicrobiologyOpen, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.9field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Chelsea S RuleDepartment of Microbiology and Immunology, University of Michigan Medical School, Ann Arbor, Michigan.
Marcella PatrickDepartment of Microbiology and Immunology, University of Michigan Medical School, Ann Arbor, Michigan.
Jodi L CambergDivision of Infectious Diseases, Department of Medicine, University of Maryland School of Medicine, Rockville, Maryland.
Natalie MaricicDepartment of Microbiology and Immunology, University of Michigan Medical School, Ann Arbor, Michigan.
Wim G HolDepartment of Biochemistry, Biomolecular Structure Center, University of Washington, Seattle, Washington.
Maria SandkvistDepartment of Microbiology and Immunology, University of Michigan Medical School, Ann Arbor, Michigan. mariasan@umich.edu.
University of Michigan–Ann Arbor · USUniversity of Maryland, Baltimore · USUniversity of Washington · US

Funding

Cellular Biotechnology Training Program (CBTP)T32GM008353 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI SCHWENDEMAN, ANNA · 1991 to 2021
$9.3M
STRUCTURAL STUDY OF HEAT-LABILE ENTEROTOXINR01AI034501 · NIAID · UNIVERSITY OF WASHINGTON · PI HOL, WILHELMUS G. J. · 1993 to 2013
$5.4M
Organization and Function of a Type II Secretion ComplexR01AI049294 · NIAID · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI SANDKVIST, MARIA B · 2002 to 2012
$2.9M
Organization and function of a type II secretion complexR56AI049294 · NIAID · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI SANDKVIST, MARIA B · 2015 to 2015
$393k
NIAID NIH HHS R01 AI034501NIAID NIH HHS R01 AI049294NIAID NIH HHS R56 AI049294NIGMS NIH HHS T32 GM008353
6 · The paper itself

Abstract

The type II secretion system Eps in Vibrio cholerae promotes the extracellular transport of cholera toxin and several hydrolytic enzymes and is a major virulence system in many Gram-negative pathogens which is structurally related to the type IV pilus system. The cytoplasmic ATPase EpsE provides the energy for exoprotein secretion through ATP hydrolysis. EpsE contains a unique metal-binding domain that coordinates zinc through a tetracysteine motif (CXXCX

Indexed as

Adenosine TriphosphatasesAdenosine TriphosphateBacterial ProteinsBiological TransportCholera ToxinFimbriae ProteinsMembrane ProteinsMembrane Transport ProteinsProtein Structure, TertiaryPseudomonas aeruginosaType II Secretion SystemsVibrio choleraeZincAdenosine TriphosphatasesAdenosine TriphosphateBacterial ProteinsCholera ToxinEpsE protein, Vibrio choleraeFimbriae ProteinsMembrane ProteinsMembrane Transport ProteinsType II Secretion SystemsxcpR protein, Pseudomonas aeruginosaZincATPasetetracysteinetype II secretionzinc.

Identifiers

PMID27168165
PMCPMC5061722
OpenAlexW2411804729

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.