Evidence map›Paper›PMID 27166816›Full record

ArticleBiophysical journal2016

Probing the Twisted Structure of Sickle Hemoglobin Fibers via Particle Simulations.

Lu Lu, Xuejin Li, Peter G Vekilov, George Em Karniadakis

Abstract read
In one paragraph

Article in Biophysical journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Article
  3. Allosteric control of hemoglobin S fiber formation by oxygen and its relation to the pathophysiology of sickle cell disease.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  4. Article
  5. Review
  6. Article
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  9. Review
  10. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Lu LuSchool of Engineering, Brown University, Providence, Rhode Island.
Xuejin LiDivision of Applied Mathematics, Brown University, Providence, Rhode Island. Electronic address: xuejin_li@brown.edu.
Peter G VekilovDepartments of Chemical and Biomolecular Engineering and Chemistry, University of Houston, Houston, Texas.
George Em KarniadakisDivision of Applied Mathematics, Brown University, Providence, Rhode Island. Electronic address: george_karniadakis@brown.edu.

Funding

Multiscale Modeling of Sickle Cell Anemia: Methods and ValidationU01HL114476 · NHLBI · BROWN UNIVERSITY · PI DAO, MING, HIGGINS, JOHN MATTHEW · 2013 to 2017
$3.9M
NHLBI NIH HHS U01 HL114476
6 · The paper itself

Abstract

Polymerization of sickle hemoglobin (HbS) is the primary pathogenic event of sickle cell disease. For insight into the nature of the HbS polymer fiber formation, we develop a particle model-resembling a coarse-grained molecular model-constructed to match the intermolecular contacts between HbS molecules. We demonstrate that the particle model predicts the formation of HbS polymer fibers by attachment of monomers to rough fiber ends and the growth rate increases linearly with HbS concentration. We show that the characteristic 14-molecule fiber cross section is preserved during growth. We also correlate the asymmetry of the contact sites on the HbS molecular surface with the structure of the polymer fiber composed of seven helically twisted double strands. Finally, we show that the same asymmetry mediates the mechanical and structural properties of the HbS polymer fiber.

Indexed as

Molecular Dynamics SimulationProtein MultimerizationBiomechanical PhenomenaHemoglobin, SickleProtein Structure, QuaternaryHemoglobin, Sickle

Identifiers

PMID27166816
PMCPMC4940994

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.