Evidence map›Paper›PMID 27166705›Full record

ArticleInternational journal of legal medicine2016

Development of new PCR multiplex system by the simultaneous detection of 10 miniSTRs, SE33, Penta E, Penta D, and four Y-STRs.

Muhammad Shafique, Muhammad Saqib Shahzad, Ziaur Rahman, Muhammad Adnan Shan, Rukhsana Perveen, Muhammad Shahzad, Manzoor Hussain, Ahmad Ali Shahid, Tayyab Husnain

Abstract read
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Article in International journal of legal medicine, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.7field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
  3. Developmental validation of the HomyGene19+14Y System.International journal of legal medicine · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Muhammad ShafiqueForensic DNA Typing Laboratory, National Centre of Excellence in Molecular Biology, University of the Punjab, Lahore, 53700, Pakistan. shafique@cemb.edu.pk.
Muhammad Saqib ShahzadFaculty of Life Sciences, University of Central Punjab, Lahore, Pakistan.
Ziaur RahmanForensic DNA Typing Laboratory, National Centre of Excellence in Molecular Biology, University of the Punjab, Lahore, 53700, Pakistan.
Muhammad Adnan ShanForensic Services Laboratory, Centre for Applied Molecular Biology, University of the Punjab, Lahore, 53700, Pakistan.
Rukhsana PerveenForensic Services Laboratory, Centre for Applied Molecular Biology, University of the Punjab, Lahore, 53700, Pakistan.
Muhammad ShahzadForensic Services Laboratory, Centre for Applied Molecular Biology, University of the Punjab, Lahore, 53700, Pakistan.
Manzoor HussainForensic Services Laboratory, Centre for Applied Molecular Biology, University of the Punjab, Lahore, 53700, Pakistan.
Ahmad Ali ShahidForensic DNA Typing Laboratory, National Centre of Excellence in Molecular Biology, University of the Punjab, Lahore, 53700, Pakistan.
Tayyab HusnainForensic DNA Typing Laboratory, National Centre of Excellence in Molecular Biology, University of the Punjab, Lahore, 53700, Pakistan.
University of the Punjab · PKUniversity of Central Punjab · PKCentre of Excellence in Molecular Biology · PK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The 18 loci multiplex system has been instigated for co-amplification and fluorescent detection of Amelogenin and 17 STRs, including 10 MiniSTRs (CSF1PO, D18S51, D7S820, D2S1338, TPOX, D13S317, FGA, D5S818, D21S11, D16S539), SE33, Penta E, Penta D, and four Y-STRs (DYS385a/b, DYS438, DYS392). This multiplex system was developed for the simultaneous analysis of compromised DNA samples, Y-amelogenin marker mutation, motherless paternity issues where single allele sharing occurs at autosomal STRs in unrelated individuals, and other complex forensic cases. Selection of loci, primers, and allelic ladders were designed and created in-house with a design strategy to work in this multiplex. The multiplex system was evaluated by sensitivity, specificity, stability, precision and accuracy, case-type samples, mixture studies, PCR-based and population distribution studies to establish the robustness and reliability of the system as the current requirements of the forensic case work. Among all the markers evaluated for this study, 209 alleles including 44 variants were observed with combined power of discrimination, combined power of exclusion, and the combined probability of matching calculated as 0.999999999999999999893916339344, 0.999993816173890, and 5.90019 × 10

Indexed as

DNA FingerprintingAmelogeninAnimalsChromosomes, Human, YGenetic MarkersGenetics, PopulationGenotypeHumansMinisatellite RepeatsMultiplex Polymerase Chain ReactionReproducibility of ResultsSpecies SpecificityTandem Repeat SequencesAmelogeninGenetic MarkersForensicMiniSTRsPCR multiplexPenta DPenta ESE33Y-STRs

Identifiers

PMID27166705
OpenAlexW2367724494

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.