Evidence map›Paper›PMID 27166422›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

A repeat protein links Rubisco to form the eukaryotic carbon-concentrating organelle.

Luke C M Mackinder, Moritz T Meyer, Tabea Mettler-Altmann, Vivian K Chen, Madeline C Mitchell, Oliver Caspari, Elizabeth S Freeman Rosenzweig, Leif Pallesen, Gregory Reeves, Alan Itakura and 9 more

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 136 papers.

0numbers the graph read from it
0cells of the map it votes in
136citing papers in PubMed
11.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

136 citing papers in PubMed, 281 citations in OpenAlex.

  1. Transfer of chloroplastSynthetic and systems biotechnology · 2027
    Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. RBMP2 shapes specialized membranes for CObioRxiv : the preprint server for biology · 2026
    Article
  10. Article
  11. Article
  12. SAGA1 and SAGA2 localize the starch sheath to the pyrenoid inProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  13. Architectural and biochemical advances in understanding microbial COThe Plant journal : for cell and molecular biology · 2026
    Review
  14. Article
  15. Article
  16. Article
  17. SAGA1 and SAGA2 localize the starch sheath to the pyrenoid inbioRxiv : the preprint server for biology · 2026
    Article
  18. Review
  19. Metabolic rewiring and biomass redistribution enable optimized mixotrophic growth in Chlamydomonas.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  20. Article

76 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 7 institutions in 3 countries.

Luke C M MackinderDepartment of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305;
Moritz T MeyerDepartment of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, United Kingdom;
Tabea Mettler-AltmannMax Planck Institute of Molecular Plant Physiology, 14476 Potsdam-Golm, Germany;
Vivian K ChenDepartment of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305; Department of Biology, Stanford University, Stanford, CA 94305;
Madeline C MitchellDepartment of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, United Kingdom;
Oliver CaspariDepartment of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, United Kingdom;
Elizabeth S Freeman RosenzweigDepartment of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305; Department of Biology, Stanford University, Stanford, CA 94305;
Leif PallesenDepartment of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305;
Gregory ReevesDepartment of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305;
Alan ItakuraDepartment of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305; Department of Biology, Stanford University, Stanford, CA 94305;
Robyn RothDepartment of Biology, Washington University in Saint Louis, St. Louis, MO 63130;
Frederik SommerMax Planck Institute of Molecular Plant Physiology, 14476 Potsdam-Golm, Germany;
Stefan GeimerInstitute of Cell Biology, University of Bayreuth, 95440 Bayreuth, Germany.
Timo MühlhausMax Planck Institute of Molecular Plant Physiology, 14476 Potsdam-Golm, Germany;
Michael SchrodaMax Planck Institute of Molecular Plant Physiology, 14476 Potsdam-Golm, Germany;
Ursula GoodenoughDepartment of Biology, Washington University in Saint Louis, St. Louis, MO 63130;
Mark StittMax Planck Institute of Molecular Plant Physiology, 14476 Potsdam-Golm, Germany;
Howard GriffithsDepartment of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, United Kingdom;
Martin C JonikasDepartment of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305; Department of Biology, Stanford University, Stanford, CA 94305; mjonikas@carnegiescience.edu.
Max Planck Institute of Molecular Plant Physiology · DECarnegie Institution for Science · USUniversity of Cambridge · GBDepartment of Plant Biology · USWashington University in St. Louis · USStanford University · USUniversity of Bayreuth · DE

Funding

Supplement to Enhance Wellness and Resiliency in the Graduate EnvironmentT32GM007276 · NIGMS · STANFORD UNIVERSITY · PI MORRISON, ASHBY J. · 1985 to 2023
$32.9M
NIGMS NIH HHS T32 GM007276
6 · The paper itself

Abstract

Biological carbon fixation is a key step in the global carbon cycle that regulates the atmosphere's composition while producing the food we eat and the fuels we burn. Approximately one-third of global carbon fixation occurs in an overlooked algal organelle called the pyrenoid. The pyrenoid contains the CO2-fixing enzyme Rubisco and enhances carbon fixation by supplying Rubisco with a high concentration of CO2 Since the discovery of the pyrenoid more that 130 y ago, the molecular structure and biogenesis of this ecologically fundamental organelle have remained enigmatic. Here we use the model green alga Chlamydomonas reinhardtii to discover that a low-complexity repeat protein, Essential Pyrenoid Component 1 (EPYC1), links Rubisco to form the pyrenoid. We find that EPYC1 is of comparable abundance to Rubisco and colocalizes with Rubisco throughout the pyrenoid. We show that EPYC1 is essential for normal pyrenoid size, number, morphology, Rubisco content, and efficient carbon fixation at low CO2 We explain the central role of EPYC1 in pyrenoid biogenesis by the finding that EPYC1 binds Rubisco to form the pyrenoid matrix. We propose two models in which EPYC1's four repeats could produce the observed lattice arrangement of Rubisco in the Chlamydomonas pyrenoid. Our results suggest a surprisingly simple molecular mechanism for how Rubisco can be packaged to form the pyrenoid matrix, potentially explaining how Rubisco packaging into a pyrenoid could have evolved across a broad range of photosynthetic eukaryotes through convergent evolution. In addition, our findings represent a key step toward engineering a pyrenoid into crops to enhance their carbon fixation efficiency.

Indexed as

Carbon DioxideChlamydomonas reinhardtiiOrganellesRibulose-Bisphosphate CarboxylaseCarbon DioxideRibulose-Bisphosphate Carboxylasecarbon fixationChlamydomonas reinhardtiiCO2-concentrating mechanismpyrenoidRubisco

Identifiers

PMID27166422
PMCPMC4889370
OpenAlexW2366572993

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.