Evidence map›Paper›PMID 27164932›Full record

ArticleActa neuropathologica2016

Comparative interactomics analysis of different ALS-associated proteins identifies converging molecular pathways.

Anna M Blokhuis, Max Koppers, Ewout J N Groen, Dianne M A van den Heuvel, Stefano Dini Modigliani, Jasper J Anink, Katsumi Fumoto, Femke van Diggelen, Anne Snelting, Peter Sodaar and 8 more

Open access · hybridAbstract readComparative Study
In one paragraph

Article in Acta neuropathologica, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 92 papers.

0numbers the graph read from it
0cells of the map it votes in
92citing papers in PubMed
10.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

92 citing papers in PubMed, 143 citations in OpenAlex.

  1. TDP-43: [GU]-ardian of the transcriptome.Molecular neurodegeneration · 2026
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  9. Context-dependent Interactors Regulate TDP-43 Dysfunction in ALS/FTLD.bioRxiv : the preprint server for biology · 2025
    Article
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32 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 8 institutions in 4 countries.

Anna M BlokhuisDepartment of Translational Neuroscience, Brain Center Rudolf Magnus, University Medical Center Utrecht, Utrecht, The Netherlands.
Max KoppersDepartment of Translational Neuroscience, Brain Center Rudolf Magnus, University Medical Center Utrecht, Utrecht, The Netherlands.
Ewout J N GroenDepartment of Translational Neuroscience, Brain Center Rudolf Magnus, University Medical Center Utrecht, Utrecht, The Netherlands.
Dianne M A van den HeuvelDepartment of Translational Neuroscience, Brain Center Rudolf Magnus, University Medical Center Utrecht, Utrecht, The Netherlands.
Stefano Dini ModiglianiCenter for Life Nano Science@Sapienza, Istituto Italiano di Tecnologia, Rome, Italy.
Jasper J AninkDepartment of (Neuro)Pathology, Academic Medical Center, Amsterdam, The Netherlands.
Katsumi FumotoDepartment of Translational Neuroscience, Brain Center Rudolf Magnus, University Medical Center Utrecht, Utrecht, The Netherlands.
Femke van DiggelenDepartment of Translational Neuroscience, Brain Center Rudolf Magnus, University Medical Center Utrecht, Utrecht, The Netherlands.
Anne SneltingDepartment of Translational Neuroscience, Brain Center Rudolf Magnus, University Medical Center Utrecht, Utrecht, The Netherlands.
Peter SodaarDepartment of Neurology and Neurosurgery, Brain Center Rudolf Magnus, University Medical Center Utrecht, Utrecht, The Netherlands.
Bert M VerheijenDepartment of Translational Neuroscience, Brain Center Rudolf Magnus, University Medical Center Utrecht, Utrecht, The Netherlands.
Jeroen A A DemmersProteomics Center, Erasmus University Medical Center, Rotterdam, The Netherlands.
Jan H VeldinkDepartment of Neurology and Neurosurgery, Brain Center Rudolf Magnus, University Medical Center Utrecht, Utrecht, The Netherlands.
Eleonora AronicaDepartment of (Neuro)Pathology, Academic Medical Center, Amsterdam, The Netherlands.
Irene BozzoniDepartment of Biology and Biotechnology Charles Darwin and IBPM, Sapienza University of Rome, Rome, Italy.
Jeroen den HertogHubrecht Institute-KNAW and University Medical Center Utrecht, Utrecht, The Netherlands.
Leonard H van den BergDepartment of Neurology and Neurosurgery, Brain Center Rudolf Magnus, University Medical Center Utrecht, Utrecht, The Netherlands.
R Jeroen PasterkampDepartment of Translational Neuroscience, Brain Center Rudolf Magnus, University Medical Center Utrecht, Utrecht, The Netherlands. r.j.pasterkamp@umcutrecht.nl.
University Medical Center Utrecht · NLAcademic Medical Center · NLErasmus MC · NLHubrecht Institute for Developmental Biology and Stem Cell Research · NLItalian Institute of Technology · ITNetherlands Institute for Neuroscience · NLSapienza University of Rome · ITUniversity of Edinburgh · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Amyotrophic lateral sclerosis (ALS) is a devastating neurological disease with no effective treatment available. An increasing number of genetic causes of ALS are being identified, but how these genetic defects lead to motor neuron degeneration and to which extent they affect common cellular pathways remains incompletely understood. To address these questions, we performed an interactomic analysis to identify binding partners of wild-type (WT) and ALS-associated mutant versions of ATXN2, C9orf72, FUS, OPTN, TDP-43 and UBQLN2 in neuronal cells. This analysis identified several known but also many novel binding partners of these proteins. Interactomes of WT and mutant ALS proteins were very similar except for OPTN and UBQLN2, in which mutations caused loss or gain of protein interactions. Several of the identified interactomes showed a high degree of overlap: shared binding partners of ATXN2, FUS and TDP-43 had roles in RNA metabolism; OPTN- and UBQLN2-interacting proteins were related to protein degradation and protein transport, and C9orf72 interactors function in mitochondria. To confirm that this overlap is important for ALS pathogenesis, we studied fragile X mental retardation protein (FMRP), one of the common interactors of ATXN2, FUS and TDP-43, in more detail in in vitro and in vivo model systems for FUS ALS. FMRP localized to mutant FUS-containing aggregates in spinal motor neurons and bound endogenous FUS in a direct and RNA-sensitive manner. Furthermore, defects in synaptic FMRP mRNA target expression, neuromuscular junction integrity, and motor behavior caused by mutant FUS in zebrafish embryos, could be rescued by exogenous FMRP expression. Together, these results show that interactomics analysis can provide crucial insight into ALS disease mechanisms and they link FMRP to motor neuron dysfunction caused by FUS mutations.

Indexed as

Adaptor Proteins, Signal TransducingAdaptor Proteins, Vesicular TransportAmyotrophic Lateral SclerosisAnimalsAtaxin-2Autophagy-Related ProteinsC9orf72 ProteinCell Cycle ProteinsDisease Models, AnimalDNA-Binding ProteinsEye ProteinsFragile X Messenger Ribonucleoprotein 1Guanine Nucleotide Exchange FactorsMembrane Transport ProteinsMice, Inbred C57BLMitochondriaAdaptor Proteins, Signal TransducingAdaptor Proteins, Vesicular TransportAtaxin-2Atxn2 protein, mouseAutophagy-Related ProteinsC9orf72 ProteinC9orf72 protein, mouseCell Cycle ProteinsDNA-Binding ProteinsEye ProteinsFmr1 protein, mouseFragile X Messenger Ribonucleoprotein 1FUS protein, mouseGuanine Nucleotide Exchange FactorsMembrane Transport ProteinsMutant ProteinsOptn protein, mouseRNA-Binding Protein FUSTardbp protein, mouseUBQLN2 protein, mouseAmyotrophic lateral sclerosisC9orf72FMRPFUSMotor neuronTDP-43

Identifiers

PMID27164932
PMCPMC4947123
OpenAlexW2377746043

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.