Evidence map›Paper›PMID 27164864›Full record

ArticleMarine biotechnology (New York, N.Y.)2016

Quantification of the Genetic Expression of bgl-A, bgl, and CspA and Enzymatic Characterization of β-Glucosidases from Shewanella sp. G5.

Héctor Antonio Cristóbal, Hugo Ramiro Poma, Carlos Mauricio Abate, Verónica Beatriz Rajal

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Article in Marine biotechnology (New York, N.Y.), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
1.0field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 3 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Héctor Antonio CristóbalInstituto de Investigaciones para la Industria Química, Universidad Nacional de Salta (INIQUI - CONICET-UNSa), Av. Bolivia 5150, 4400, Salta, Argentina. hacristobal@gmail.com.
Hugo Ramiro PomaInstituto de Investigaciones para la Industria Química, Universidad Nacional de Salta (INIQUI - CONICET-UNSa), Av. Bolivia 5150, 4400, Salta, Argentina.
Carlos Mauricio AbateInstituto de Investigaciones para la Industria Química, Universidad Nacional de Salta (INIQUI - CONICET-UNSa), Av. Bolivia 5150, 4400, Salta, Argentina.
Verónica Beatriz RajalInstituto de Investigaciones para la Industria Química, Universidad Nacional de Salta (INIQUI - CONICET-UNSa), Av. Bolivia 5150, 4400, Salta, Argentina.
National University of Salta · ARConsejo Nacional de Investigaciones Científicas y Técnicas · AR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Shewanella sp. G5, a psychrotolerant marine bacterium, has a cold-shock protein (CspA) and three β-glucosidases, two of which were classified in the glycosyl hydrolase families 1 and 3 and are encoded by bgl-A and bgl genes, respectively. Shewanella sp. G5 was cultured on Luria-Bertani (LB) and Mineral Medium Brunner (MMB) media with glucose and cellobiose at various temperatures and pH 6 and 8. Relative quantification of the expression levels of all three genes was studied by real-time PCR with the comparative Ct method (2(-ΔΔCt)) using the gyrB housekeeping gene as a normalizer. Results showed that the genes had remarkably different genetic expression levels under the conditions evaluated, with increased expression of all genes obtained on MMB with cellobiose at 30 °C. Specific growth rate and specific β-glucosidase activity were also determined for all the culture conditions. Shewanella sp. G5 was able to grow on both media at 4 °C, showing the maximum specific growth rate on LB with cellobiose at 37 °C. The specific β-glucosidase activity obtained on MMB with cellobiose at 30 °C was 25 to 50 % higher than for all other conditions. At pH 8, relative activity was 34, 60, and 63 % higher at 30 °C than at 10 °C, with three peaks at 10, 25, and 37 °C on both media. Enzyme activity increased by 61 and 47 % in the presence of Ca(2+) and by 24 and 31 % in the presence of Mg(2+) on LB and MMB at 30 °C, respectively, but it was totally inhibited by Hg(2+), Cu(2+), and EDTA. Moreover, this activity was slightly decreased by SDS, Zn(2+), and DTT, all at 5 mM. Ethanol (14 % v/v) and glucose (100 mM) also reduced the activity by 63 and 60 %, respectively.

Indexed as

Gene Expression Regulation, BacterialIndustrial MicrobiologyAdaptation, PhysiologicalAquatic OrganismsBacterial Proteinsbeta-GlucosidaseCations, DivalentCellobioseDNA GyraseFermentationGenes, EssentialGlucoseHydrogen-Ion ConcentrationIsoenzymesKineticsMagnesiumBacterial Proteinsbeta-GlucosidaseCations, DivalentCellobiosecold shock protein CS7.4, BacteriaDNA GyraseGlucoseIsoenzymesMagnesiumBiotechnology industryMarine bacteriaReal-time PCRShewanellaβ-glucosidases

Identifiers

PMID27164864
OpenAlexW2376512751

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.