Evidence map›Paper›PMID 27164089›Full record

ArticleInternational journal of molecular sciences2016

Gene Mutation Profiles in Primary Diffuse Large B Cell Lymphoma of Central Nervous System: Next Generation Sequencing Analyses.

Milena Todorovic Balint, Jelena Jelicic, Biljana Mihaljevic, Jelena Kostic, Bojana Stanic, Bela Balint, Nadja Pejanovic, Bojana Lucic, Natasa Tosic, Irena Marjanovic and 10 more

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.9field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 36 citations in OpenAlex.

  1. Article
  2. Updates of primary central nervous system lymphoma.Therapeutic advances in hematology · 2024
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  8. Targeted massively parallel sequencing of mature lymphoid neoplasms: assessment of empirical application and diagnostic utility in routine clinical practice.Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 4 institutions in 2 countries.

Milena Todorovic BalintClinic for Hematology, Clinical Center of Serbia, Belgrade 11000, Serbia. bb.lena@gmail.com.
Jelena JelicicClinic for Hematology, Clinical Center of Serbia, Belgrade 11000, Serbia. jecajelicic@yahoo.com.
Biljana MihaljevicClinic for Hematology, Clinical Center of Serbia, Belgrade 11000, Serbia. zmzg@sezampro.rs.
Jelena KosticInstitute of Molecular Genetics and Genetic Engineering, University of Belgrade, Belgrade 11010, Serbia. kostichelena@gmail.com.
Bojana StanicInstitute of Molecular Genetics and Genetic Engineering, University of Belgrade, Belgrade 11010, Serbia. bojanastanic@yahoo.com.
Bela BalintInstitute of Transfusiology and Hemobiology of Military Medical Academy, Belgrade 11000, Serbia. belabalint26@yahoo.com.
Nadja PejanovicInstitute of Molecular Genetics and Genetic Engineering, University of Belgrade, Belgrade 11010, Serbia. nadjapejanovic@gmail.com.
Bojana LucicInstitute of Molecular Genetics and Genetic Engineering, University of Belgrade, Belgrade 11010, Serbia. lucic.bojana@gmail.com.
Natasa TosicInstitute of Molecular Genetics and Genetic Engineering, University of Belgrade, Belgrade 11010, Serbia. nmtosic@sezampro.rs.
Irena MarjanovicInstitute of Molecular Genetics and Genetic Engineering, University of Belgrade, Belgrade 11010, Serbia. irenas24@gmail.com.
Maja StojiljkovicInstitute of Molecular Genetics and Genetic Engineering, University of Belgrade, Belgrade 11010, Serbia. maja.stojiljkovic@yahoo.com.
Teodora Karan-DjurasevicInstitute of Molecular Genetics and Genetic Engineering, University of Belgrade, Belgrade 11010, Serbia. dora_karan@yahoo.com.
Ognjen PerisicSeven Bridges Genomics, Belgrade 11000, Serbia. ognjen.perisic@gmail.com.
Goran RakocevicSeven Bridges Genomics, Belgrade 11000, Serbia. goran.rakocevic@sbgenomics.com.
Milos PopovicSeven Bridges Genomics, Belgrade 11000, Serbia. milos.popovic@sbgenomics.com.
Sava RaicevicDepartment of Histopathology, Clinical Center of Serbia, Belgrade 11000, Serbia. jjelicic86@gmail.com.
Jelena BilaClinic for Hematology, Clinical Center of Serbia, Belgrade 11000, Serbia. idabakrac123@gmail.com.
Darko AnticClinic for Hematology, Clinical Center of Serbia, Belgrade 11000, Serbia. milosmak13@gmail.com.
Bosko AndjelicClinic for Hematology, Clinical Center of Serbia, Belgrade 11000, Serbia. belab@imi.bg.ac.rs.
Sonja PavlovicInstitute of Molecular Genetics and Genetic Engineering, University of Belgrade, Belgrade 11010, Serbia. sonya@sezampro.rs.
University of Belgrade · RSSeven Bridges Genomics (United States) · USCentar za Promociju Nauke · RSMilitary Medical Academy · RS

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The existence of a potential primary central nervous system lymphoma-specific genomic signature that differs from the systemic form of diffuse large B cell lymphoma (DLBCL) has been suggested, but is still controversial. We investigated 19 patients with primary DLBCL of central nervous system (DLBCL CNS) using the TruSeq Amplicon Cancer Panel (TSACP) for 48 cancer-related genes. Next generation sequencing (NGS) analyses have revealed that over 80% of potentially protein-changing mutations were located in eight genes (CTNNB1, PIK3CA, PTEN, ATM, KRAS, PTPN11, TP53 and JAK3), pointing to the potential role of these genes in lymphomagenesis. TP53 was the only gene harboring mutations in all 19 patients. In addition, the presence of mutated TP53 and ATM genes correlated with a higher total number of mutations in other analyzed genes. Furthermore, the presence of mutated ATM correlated with poorer event-free survival (EFS) (p = 0.036). The presence of the mutated SMO gene correlated with earlier disease relapse (p = 0.023), inferior event-free survival (p = 0.011) and overall survival (OS) (p = 0.017), while mutations in the PTEN gene were associated with inferior OS (p = 0.048). Our findings suggest that the TP53 and ATM genes could be involved in the molecular pathophysiology of primary DLBCL CNS, whereas mutations in the PTEN and SMO genes could affect survival regardless of the initial treatment approach.

Indexed as

MutationAdultAgedCase-Control StudiesCentral Nervous System NeoplasmsFemaleHumansLymphoma, Large B-Cell, DiffuseMaleMiddle AgedOncogene ProteinsOncogene ProteinsATMprimary DLBCL CNSPTENSMOTP53

Identifiers

PMID27164089
PMCPMC4881509
OpenAlexW2346315422

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.