Evidence map›Paper›PMID 27163826›Full record

ArticleJournal of Alzheimer's disease : JAD2016

Gene Expression of Quaking in Sporadic Alzheimer's Disease Patients is Both Upregulated and Related to Expression Levels of Genes Involved in Amyloid Plaque and Neurofibrillary Tangle Formation.

Bryn Farnsworth, Christiane Peuckert, Bettina Zimmermann, Elena Jazin, Petronella Kettunen, Lina Sors Emilsson

Open access · bronzeAbstract read
In one paragraph

Article in Journal of Alzheimer's disease : JAD, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.2field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 18 citations in OpenAlex.

  1. Allele-specific splicing modulates protein isoforms and Alzheimer's risk.bioRxiv : the preprint server for biology · 2026
    Article
  2. Review
  3. RNA binding proteins in cardiovascular development and disease.Current topics in developmental biology · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Bryn FarnsworthDepartment of Evolution and Development, Evolutionary Biology Centre, Uppsala University, Uppsala, Sweden.
Christiane PeuckertDepartment of Neuroscience, Uppsala Biomedical Centre, Uppsala University, Uppsala, Sweden.
Bettina ZimmermannDepartment of Evolution and Development, Evolutionary Biology Centre, Uppsala University, Uppsala, Sweden.
Elena JazinDepartment of Evolution and Development, Evolutionary Biology Centre, Uppsala University, Uppsala, Sweden.
Petronella KettunenInstitute of Neuroscience and Physiology, Department of Psychiatry and Neurochemistry, The Sahlgrenska Academy, University of Gothenburg, Gothenburg, Sweden.
Lina Sors EmilssonDepartment of Evolution and Development, Evolutionary Biology Centre, Uppsala University, Uppsala, Sweden.
Uppsala University · SEJohn Radcliffe Hospital · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Quaking (QKI) is a gene exclusively expressed within glial cells. QKI has previously been implicated in various neurological disorders and diseases, including Alzheimer's disease (AD), a condition for which increasing evidence suggests a central role of glia cells. The objective of the present study was to investigate the expression levels of QKI and three QKI isoforms (QKI5, QKI6, and QKI7) in AD. Genes that have previously been related to the ontogeny and progression of AD, specifically APP, PSEN1, PSEN2, and MAPT, were also investigated. A real-time PCR assay of 123 samples from human postmortem sporadic AD patients and control brains was performed. The expression values were analyzed with an analysis of covariance model and subsequent multiple regressions to explore the possibility of related expression values between QKI, QKI isoforms, and AD-related genes. Further, the sequences of AD-related genes were analyzed for the presence of QKI binding domains. QKI and all measured QKI isoforms were found to be significantly upregulated in AD samples, relative to control samples. However, APP, PSEN1, PSEN2, and MAPT were not found to be significantly different. QKI and QKI isoforms were found to be predictive for the variance of APP, PSEN1, PSEN2, and MAPT, and putative QKI binding sites suggests an interaction with QKI. Overall, these results implicate a possible role of QKI in AD, although the exact mechanism by which this occurs remains to be uncovered.

Indexed as

Alzheimer DiseaseAge FactorsAmyloid beta-Protein PrecursorAnalysis of VarianceBrainFemaleHumansLinear ModelsMaleMutationNeurofibrillary TanglesPlaque, AmyloidPresenilin-1Presenilin-2Protein IsoformsRNA-Binding ProteinsAmyloid beta-Protein PrecursorPresenilin-1Presenilin-2Protein IsoformsPSEN1 protein, humanPSEN2 protein, humanQKI protein, humanRNA-Binding ProteinsRNA, Messengertau ProteinsAmyloid-βAPPgene expressiongliaMAPTneurodegenerative diseasesPSEN1PSEN2real-time polymerase chain reaction

Identifiers

PMID27163826
PMCPMC4942724
OpenAlexW2383074041

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.