ArticleHorticulture research2016
Transcriptome profiling of Cucumis melo fruit development and ripening.
Article in Horticulture research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.
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Who cites it
26 citing papers in PubMed, 67 citations in OpenAlex.
- Introgression line libraries in melon (Molecular breeding : new strategies in plant improvement · 2026Review
- Comprehensive characterization and expression profiling of sucrose phosphate synthase (SPS) and sucrose synthase (SUS) family in Cucumis melo under the application of nitrogen and potassium.BMC plant biology · 2025Article
- Metabolomics Unveiled the Accumulation Characteristics of Taste Compounds During the Development and Maturation of Litchi Fruit.Foods (Basel, Switzerland) · 2025Article
- Transcriptome reveals differential expression of flavor and color in closely related strains of tomato (PeerJ · 2025Article
- Unlocking the potential of 'Egusi' melon (Frontiers in plant science · 2025Review
- Time-Series Transcriptome ofGenes · 2024Article
- Transcriptomics reveal useful resources for examining fruit development and variation in fruit size inFrontiers in plant science · 2024Article
- Basic leucine zipper geneHorticulture research · 2023Article
- Genome-Wide Identification and Expression Patterns of Cucumber Invertases and Their Inhibitor Genes.International journal of molecular sciences · 2023Article
- Phloem unloading in cultivated melon fruits follows an apoplasmic pathway during enlargement and ripening.Horticulture research · 2023Article
- Combined Metabolome and Transcriptome Analysis Elucidates Sugar Accumulation in Wucai (International journal of molecular sciences · 2023Article
- New Insights intoInternational journal of molecular sciences · 2022Article
- Comparative transcriptomic analysis of two Cucumis melo var. saccharinus germplasms differing in fruit physical and chemical characteristics.BMC plant biology · 2022Article
- Flavonoid biosynthesis in four Dendrobium species based on transcriptome sequencing and metabolite analysis.Molecular biology reports · 2022Article
- Multispecies transcriptomes reveal core fruit development genes.Frontiers in plant science · 2022Article
- Extreme sugar accumulation in late fig ripening is accompanied by global changes in sugar metabolism and transporter gene expression.Physiologia plantarum · 2022Article
- Identification of Key Gene Networks Controlling Soluble Sugar and Organic Acid Metabolism During Oriental Melon Fruit Development by Integrated Analysis of Metabolic and Transcriptomic Analyses.Frontiers in plant science · 2022Article
- Alternative splicing during fruit development among fleshy fruits.BMC genomics · 2021Article
- Metabolic and transcriptomic analysis of two Cucurbita moschata germplasms throughout fruit development.BMC genomics · 2020Article
- Transcriptome profiling of non-climacteric 'yellow' melon during ripening: insights on sugar metabolism.BMC genomics · 2020Article
Corrections and comments
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Authors and funding
6 authors at 3 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Hami melon (Cucumis melo) is the most important melon crop grown in the north-western provinces of China. In order to elucidate the genetic and molecular basis of developmental changes related to size, flesh, sugar and sour content, we performed a transcriptome profiling of its fruit development. Over 155 000 000 clean reads were mapped to MELONOMICS genome, yielding a total of 23 299 expressed genes. Of these, 554 genes were specifically expressed in flowers, and 3260 genes in fruit flesh tissues. The 7892 differentially expressed genes (DEGs) were related to fruit development and mediated diverse metabolic processes and pathways; 83 DEGs and 13 DEGs were possibly associated with sucrose and citric acid accumulation, respectively. The quantitative real-time PCR results showed that six out of eight selected candidate genes displayed expression trends similar to our DEGs. This study profiled the gene expression related to different growing stages of flower and fruit at the whole transcriptome level to provide an insight into the regulatory mechanism underlying Hami melon fruit development.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.