Evidence map›Paper›PMID 27162363›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

Histone deacetylase inhibition enhances antimicrobial peptide but not inflammatory cytokine expression upon bacterial challenge.

Natalie Fischer, Emmanuel Sechet, Robin Friedman, Aurélien Amiot, Iradj Sobhani, Giulia Nigro, Philippe J Sansonetti, Brice Sperandio

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
6.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 81 citations in OpenAlex.

  1. Article
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  4. Animals : an open access journal from MDPI · 2025
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  12. Mechanisms and regulation of defensins in host defense.Signal transduction and targeted therapy · 2023
    Review
  13. Article
  14. Repurposing HDAC inhibitors to enhance ribonuclease 4 and 7 expression and reduce urinary tract infection.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  15. Article
  16. Review
  17. Review
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Natalie FischerUnité de Pathogénie Microbienne Moléculaire, Institut Pasteur, 75015 Paris, France; INSERM U1202, Institut Pasteur, 75015 Paris, France;
Emmanuel SechetUnité de Pathogénie Microbienne Moléculaire, Institut Pasteur, 75015 Paris, France; INSERM U1202, Institut Pasteur, 75015 Paris, France;
Robin FriedmanUnité de Pathogénie Microbienne Moléculaire, Institut Pasteur, 75015 Paris, France; INSERM U1202, Institut Pasteur, 75015 Paris, France;
Aurélien AmiotDépartement de Gastroentérologie, Hôpital Henri Mondor, AP-HP, 94000 Créteil, France;
Iradj SobhaniDépartement de Gastroentérologie, Hôpital Henri Mondor, AP-HP, 94000 Créteil, France;
Giulia NigroUnité de Pathogénie Microbienne Moléculaire, Institut Pasteur, 75015 Paris, France; INSERM U1202, Institut Pasteur, 75015 Paris, France;
Philippe J SansonettiUnité de Pathogénie Microbienne Moléculaire, Institut Pasteur, 75015 Paris, France; INSERM U1202, Institut Pasteur, 75015 Paris, France; Chaire de Microbiologie et Maladies Infectieuses, Collège de France, 75005 Paris, France philippe.sansonetti@pasteur.fr brice.sperandio@pasteur.fr.
Brice SperandioUnité de Pathogénie Microbienne Moléculaire, Institut Pasteur, 75015 Paris, France; INSERM U1202, Institut Pasteur, 75015 Paris, France; philippe.sansonetti@pasteur.fr brice.sperandio@pasteur.fr.
Inserm · FRAssistance Publique – Hôpitaux de Paris · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Antimicrobial peptides (AMP) are defense effectors of the innate immunity playing a crucial role in the intestinal homeostasis with commensals and protection against pathogens. Herein we aimed to investigate AMP gene regulation by deciphering specific characteristics allowing their enhanced expression among innate immune genes, particularly those encoding proinflammatory mediators. Our emphasis was on epigenetic regulation of the gene encoding the AMP β-defensin 2 (HBD2), taken as a model of possibly specific induction, upon challenge with a commensal bacterium, compared with the proinflammatory cytokine IL-8. Using an in vitro model of colonic epithelial cells challenged with Escherichia coli K12, we showed that inhibition of histone deacetylases (HDAC) by trichostatin A dramatically enhanced induction of HBD2 expression, without affecting expression of IL-8. This mechanism was supported by an increased phosphorylation of histone H3 on serine S10, preferentially at the HBD2 promoter. This process occurred through activation of the IκB kinase complex, which also led to activation of NF-κB. Moreover, we demonstrated that NF-κB was modified by acetylation upon HDAC inhibition, partly by the histone acetyltransferase p300, and that both NF-κB and p300 supported enhanced induction of HBD2 expression. Furthermore, we identified additional genes belonging to antimicrobial defense and epithelial restitution pathways that showed a similar pattern of epigenetic control. Finally, we confirmed our finding in human colonic primary cells using an ex vivo organoid model. This work opens the way to use epigenetic pharmacology to achieve induction of epithelial antimicrobial defenses, while limiting the deleterious risk of an inflammatory response.

Indexed as

beta-DefensinsCaco-2 CellsE1A-Associated p300 ProteinEpigenesis, GeneticEscherichia coli K12Histone Deacetylase InhibitorsHumansInterleukin-8NF-kappa Bbeta-DefensinsCXCL8 protein, humanDEFB4A protein, humanE1A-Associated p300 ProteinEP300 protein, humanHistone Deacetylase InhibitorsInterleukin-8NF-kappa Bacetylationantimicrobial peptidescolonic mucosaepigeneticepithelial cells

Identifiers

PMID27162363
PMCPMC4889416
OpenAlexW2348252730

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.