ArticleScientific reports2016
Soil metaproteomics reveals an inter-kingdom stress response to the presence of black truffles.
Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.
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Who cites it
23 citing papers in PubMed.
- Mycorrhizal competition release and microbial dynamics in native and non-nativeApplied and environmental microbiology · 2026Article
- Bacterial communities show distinctive spatial diversity patterns in productive truffle orchards amended with peat-based substrate.Environmental microbiome · 2026Article
- Phytomycobiomes and Ecosystem Services: Mechanisms, Evidence and Routes to Application.Journal of fungi (Basel, Switzerland) · 2025Review
- Proteomic Insights into Bacterial Responses to Antibiotics: A Narrative Review.International journal of molecular sciences · 2025Review
- The Expanding Truffle Environment: A Study of the Microbial Dynamics in the Old Productive Site and the NewJournal of fungi (Basel, Switzerland) · 2024Article
- Diversity and Network Relationship Construction of Soil Fungal Communities inMicroorganisms · 2023Article
- Abiotic Stress and Belowground Microbiome: The Potential of Omics Approaches.International journal of molecular sciences · 2022Review
- Proteomic Approaches to Unravel Mechanisms of Antibiotic Resistance and Immune Evasion of Bacterial Pathogens.Frontiers in medicine · 2022Review
- Truffle species strongly shape their surrounding soil mycobiota in a Pinus armandii forest.Archives of microbiology · 2021Article
- Increasing the power of interpretation for soil metaproteomics data.Microbiome · 2021Article
- Plant-Microbe Interaction: Aboveground to Belowground, from the Good to the Bad.International journal of molecular sciences · 2021Review
- Improvement of Soil Microbial Diversity through Sustainable Agricultural Practices and Its Evaluation by -Omics Approaches: A Perspective for the Environment, Food Quality and Human Safety.Microorganisms · 2021Review
- Soil Metaproteomics for the Study of the Relationships Between Microorganisms and Plants: A Review of Extraction Protocols and Ecological Insights.International journal of molecular sciences · 2020Review
- Structural and Functional Changes in Prokaryotic Communities in Artificial Pit Mud during Chinese Baijiu Production.mSystems · 2020Article
- A Small Effort for Researchers, a Big Gain for Soil Metaproteomics.Frontiers in microbiology · 2020Article
- Rapid MALDI-TOF MS identification of commercial truffles.Scientific reports · 2019Article
- Mycorrhization ofPeerJ · 2019Article
- Nitrogen Fertilizer Amendment Alter the Bacterial Community Structure in the Rhizosphere of Rice (Frontiers in microbiology · 2019Article
- Recent Insights on Biological and Ecological Aspects of Ectomycorrhizal Fungi and Their Interactions.Frontiers in microbiology · 2018Review
- Chinese Black Truffle (Frontiers in microbiology · 2018Article
Corrections and comments
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Authors and funding
5 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
For some truffle species of the Tuber genus, the symbiotic phase is often associated with the presence of an area of scant vegetation, commonly known as the brûlé, around the host tree. Previous metagenomics studies have identified the microorganisms present inside and outside the brûlé of a Tuber melanosporum truffle-ground, but the molecular mechanisms that operate in this ecological niche remain to be clarified. To elucidate the metabolic pathways present in the brûlé, we conducted a metaproteomics analysis on the soil of a characterized truffle-ground and cross-referenced the resulting proteins with a database we constructed, incorporating the metagenomics data for the organisms previously identified in this soil. The soil inside the brûlé contained a larger number of proteins and, surprisingly, more proteins from plants, compared with the soil outside the brûlé. In addition, Fisher's Exact Tests detected more biological processes inside the brûlé; these processes were related to responses to multiple types of stress. Thus, although the brûlé has a reduced diversity of plant and microbial species, the organisms in the brûlé show strong metabolic activity. Also, the combination of metagenomics and metaproteomics provides a powerful tool to reveal soil functioning.
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