Evidence map›Paper›PMID 27161114›Full record

ArticleJournal of bacteriology2016

The UbiI (VisC) Aerobic Ubiquinone Synthase Is Required for Expression of Type 1 Pili, Biofilm Formation, and Pathogenesis in Uropathogenic Escherichia coli.

Kyle A Floyd, Courtney A Mitchell, Allison R Eberly, Spencer J Colling, Ellisa W Zhang, William DePas, Matthew R Chapman, Matthew Conover, Bridget R Rogers, Scott J Hultgren and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
4.4field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Review
  3. UropathogenicInternational journal of molecular sciences · 2025
    Article
  4. Article
  5. Article
  6. "Omics" Technologies - What Have They Told Us About UropathogenicFrontiers in cellular and infection microbiology · 2022
    Review
  7. PlasmidFrontiers in molecular biosciences · 2022
    Article
  8. Article
  9. Article
  10. Article
  11. Immunology of urinary tract infections.GMS infectious diseases · 2020
    Review
  12. mSphere · 2019
    Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Voltage-gated calcium flux mediatesProceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Kyle A FloydDepartment of Pathology, Microbiology & Immunology, Vanderbilt University School of Medicine, Nashville, Tennessee, USA.
Courtney A MitchellDepartment of Chemical and Biomolecular Engineering, Vanderbilt University, Tennessee, USA.
Allison R EberlyDepartment of Pathology, Microbiology & Immunology, Vanderbilt University School of Medicine, Nashville, Tennessee, USA.
Spencer J CollingDepartment of Pathology, Microbiology & Immunology, Vanderbilt University School of Medicine, Nashville, Tennessee, USA.
Ellisa W ZhangDepartment of Pathology, Microbiology & Immunology, Vanderbilt University School of Medicine, Nashville, Tennessee, USA.
William DePasDepartment of Molecular, Cellular & Developmental Biology, University of Michigan-Ann Arbor, Ann Arbor, Michigan, USA.
Matthew R ChapmanDepartment of Molecular, Cellular & Developmental Biology, University of Michigan-Ann Arbor, Ann Arbor, Michigan, USA.
Matthew ConoverDepartment of Molecular Microbiology & Microbial Pathogenesis, Washington University School of Medicine in Saint Louis, St. Louis, Missouri, USA.
Bridget R RogersDepartment of Chemical and Biomolecular Engineering, Vanderbilt University, Tennessee, USA.
Scott J HultgrenDepartment of Molecular Microbiology & Microbial Pathogenesis, Washington University School of Medicine in Saint Louis, St. Louis, Missouri, USA.
Maria HadjifrangiskouDepartment of Pathology, Microbiology & Immunology, Vanderbilt University School of Medicine, Nashville, Tennessee, USA maria.hadjifrangiskou@vanderbilt.edu.
Vanderbilt University · USUniversity of Michigan–Ann Arbor · USWashington University in St. Louis · US

Funding

pan-Genome of E.coli in the bladder and gut of women with recurrent UTIP50DK064540 · NIDDK · WASHINGTON UNIVERSITY · PI HULTGREN, SCOTT J. · 2002 to 2017
$17.9M
PREDOCTORAL TRAINING IN GENETICST32GM007544 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MORAN, JOHN V. · 1985 to 2022
$11.3M
CHAPERONE-ASSISTED PILI ASSEMBLY IN PATHOGENIC E. COLIR01AI029549 · NIAID · WASHINGTON UNIVERSITY · PI HULTGREN, SCOTT J., YUAN, PENG · 1991 to 2023
$5.7M
Protein and Chemical Modulation of Curli Amyloid BiogenesisR01GM118651 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Matthew Richard Chapman · 2016 to 2026
$3.0M
Tlr1: Functional and Genetic Variation in Urinary Tract InfectionF32DK101171 · NIDDK · WASHINGTON UNIVERSITY · PI CONOVER, MATTHEW S. · 2014 to 2015
$113k
NIAID NIH HHS R01 AI029549NIDDK NIH HHS F32 DK101171NIDDK NIH HHS P50 DK064540NIGMS NIH HHS R01 GM118651NIGMS NIH HHS T32 GM007544
6 · The paper itself

Abstract

unlabelledUropathogenic Escherichia coli (UPEC), which causes the majority of urinary tract infections (UTI), uses pilus-mediated adherence to initiate biofilm formation in the urinary tract. Oxygen gradients within E. coli biofilms regulate expression and localization of adhesive type 1 pili. A transposon mutant screen for strains defective in biofilm formation identified the ubiI (formerly visC) aerobic ubiquinone synthase gene as critical for UPEC biofilm formation. In this study, we characterized a nonpolar ubiI deletion mutant and compared its behavior to that of wild-type bacteria grown under aerobic and anoxic conditions. Consistent with its function as an aerobic ubiquinone-8 synthase, deletion of ubiI in UPEC resulted in reduced membrane potential, diminished motility, and reduced expression of chaperone-usher pathway pili. Loss of aerobic respiration was previously shown to negatively impact expression of type 1 pili. To determine whether this reduction in type 1 pili was due to an energy deficit, wild-type UPEC and the ubiI mutant were compared for energy-dependent phenotypes under anoxic conditions, in which quinone synthesis is undertaken by anaerobic quinone synthases. Under anoxic conditions, the two strains exhibited wild-type levels of motility but produced diminished numbers of type 1 pili, suggesting that the reduction of type 1 pilus expression in the absence of oxygen is not due to a cellular energy deficit. Acute- and chronic-infection studies in a mouse model of UTI revealed a significant virulence deficit in the ubiI mutant, indicating that UPEC encounters enough oxygen in the bladder to induce aerobic ubiquinone synthesis during infection. IMPORTANCE: The majority of urinary tract infections are caused by uropathogenic E. coli, a bacterium that can respire in the presence and absence of oxygen. The bladder environment is hypoxic, with oxygen concentrations ranging from 4% to 7%, compared to 21% atmospheric oxygen. This work provides evidence that aerobic ubiquinone synthesis must be engaged during bladder infection, indicating that UPEC bacteria sense and use oxygen as a terminal electron acceptor in the bladder and that this ability drives infection potential despite the fact that UPEC is a facultative anaerobe.

Indexed as

AnimalsBiofilmsEscherichia coli ProteinsFemaleFimbriae, BacterialGene DeletionGene Expression Regulation, BacterialGene Expression Regulation, EnzymologicMembrane PotentialsMiceMice, Inbred C3HMixed Function OxygenasesMutationUrinary Tract InfectionsUropathogenic Escherichia coliVirulenceEscherichia coli ProteinsMixed Function OxygenasesUbiI protein, E coli

Identifiers

PMID27161114
PMCPMC5019064
OpenAlexW2347158652

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.