Evidence map›Paper›PMID 27160913›Full record

ArticleCell reports2016

Cell-Type-Specific Transcriptome Analysis in the Drosophila Mushroom Body Reveals Memory-Related Changes in Gene Expression.

Amanda Crocker, Xiao-Juan Guan, Coleen T Murphy, Mala Murthy

Open access · goldAbstract read
In one paragraph

Article in Cell reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
8.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 126 citations in OpenAlex.

  1. Redox regulation of memory formation by Rrp1 inProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Octopamine in the mushroom body circuitry for learning and memory.Learning & memory (Cold Spring Harbor, N.Y.) · 2024
    Review
  10. Article
  11. Article
  12. iScience · 2024
    Article
  13. Article
  14. Article
  15. Molecular Logic of Synaptic Diversity BetweenbioRxiv : the preprint server for biology · 2023
    Article
  16. Article
  17. Review
  18. Article
  19. CREBA and CREBB in two identified neurons gate long-term memory formation inProceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  20. Single-cell RNA sequencing in Drosophila: Technologies and applications.Wiley interdisciplinary reviews. Developmental biology · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Amanda CrockerPrinceton Neuroscience Institute, Princeton University, Princeton, NJ 08544, USA.
Xiao-Juan GuanPrinceton Neuroscience Institute, Princeton University, Princeton, NJ 08544, USA.
Coleen T MurphyDepartment of Molecular Biology, Princeton University, Princeton, NJ 08544, USA; Lewis-Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ 08544, USA; Paul F. Glenn Laboratories for Aging Research, Princeton University, Princeton, NJ 08544, USA.
Mala MurthyPrinceton Neuroscience Institute, Princeton University, Princeton, NJ 08544, USA; Department of Molecular Biology, Princeton University, Princeton, NJ 08544, USA. Electronic address: mmurthy@princeton.edu.
Princeton University · US

Funding

NRSA Training Grant in Quantitative NeuroscienceT32MH065214 · NIMH · PRINCETON UNIVERSITY · PI Nathaniel Douglass Daw, KENNETH A NORMAN · 2002 to 2026
$7.9M
How does the brain solve the pattern recognition problem?DP2NS092378 · NINDS · PRINCETON UNIVERSITY · PI MURTHY, MALA · 2014 to 2014
$2.4M
NIMH NIH HHS T32 MH065214NINDS NIH HHS DP2 NS092378
6 · The paper itself

Abstract

Learning and memory formation in Drosophila rely on a network of neurons in the mushroom bodies (MBs). Whereas numerous studies have delineated roles for individual cell types within this network in aspects of learning or memory, whether or not these cells can also be distinguished by the genes they express remains unresolved. In addition, the changes in gene expression that accompany long-term memory formation within the MBs have not yet been studied by neuron type. Here, we address both issues by performing RNA sequencing on single cell types (harvested via patch pipets) within the MB. We discover that the expression of genes that encode cell surface receptors is sufficient to identify cell types and that a subset of these genes, required for sensory transduction in peripheral sensory neurons, is not only expressed within individual neurons of the MB in the central brain, but is also critical for memory formation.

Indexed as

Gene Expression RegulationMemoryAnimalsDrosophila melanogasterGene Expression ProfilingGene OntologyGenes, InsectMushroom BodiesNeuronsReceptors, Cell SurfaceReproducibility of ResultsRNA, MessengerSequence Analysis, RNAReceptors, Cell SurfaceRNA, Messenger

Identifiers

PMID27160913
PMCPMC5047377
OpenAlexW2345520071

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.