Evidence map›Paper›PMID 27159678›Full record

ArticleOncogenesis2016

Association of p53 codon72 Arg>Pro polymorphism with susceptibility to nasopharyngeal carcinoma: evidence from a case-control study and meta-analysis.

S K Sahu, S Chakrabarti, S D Roy, N Baishya, R R Reddy, S Suklabaidya, A Kumar, S Mohanty, S Maji, A Suryanwanshi and 21 more

Open access · goldAbstract read
In one paragraph

Article in Oncogenesis, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
0.9field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it, 15 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Review
  5. Review
  6. Article
  7. Article
  8. Nasopharyngeal Carcinoma Protein Interaction Mapping Analysis via Proteomic ApproachesAsian Pacific journal of cancer prevention : APJCP · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

31 authors at 11 institutions in 1 country.

S K SahuDivision of Infectious Disease Biology, Institute of Life Sciences, Bhubaneswar, India.
S ChakrabartiDivision of Infectious Disease Biology, Institute of Life Sciences, Bhubaneswar, India.
S D RoyDepartment of Radiation Oncology, Civil Hospital, Dimapur, Nagaland, India.
N BaishyaDr B. Borooah Cancer Institute, ENT Department, Guwahati, Assam, India.
R R ReddyDivision of Infectious Disease Biology, Institute of Life Sciences, Bhubaneswar, India.
S SuklabaidyaDivision of Infectious Disease Biology, Institute of Life Sciences, Bhubaneswar, India.
A KumarDivision of Infectious Disease Biology, Institute of Life Sciences, Bhubaneswar, India.
S MohantyDivision of Infectious Disease Biology, Institute of Life Sciences, Bhubaneswar, India.
S MajiDivision of Infectious Disease Biology, Institute of Life Sciences, Bhubaneswar, India.
A SuryanwanshiDivision of Infectious Disease Biology, Institute of Life Sciences, Bhubaneswar, India.
S RajasubramaniamDepartment of Biotechnology, Regional Medical Research Centre for Tribals, Jabalpur, India.
M AsthanaDivision of Infectious Disease Biology, Institute of Life Sciences, Bhubaneswar, India.
A K PandaDivision of Infectious Disease Biology, Institute of Life Sciences, Bhubaneswar, India.
S P SinghShri Ramachandra Bhanj Medical College, Cuttack, Department of Gastroentrology, Odisha, India.
S GangulyDepartment of Biotechnology, Siksha Vhabana, Visva Bharati, Santiniketan, Bolpur, India.
O P ShawDepartment of Biotechnology, Siksha Vhabana, Visva Bharati, Santiniketan, Bolpur, India.
A K BichhwaliaDepartment of Biotechnology, Siksha Vhabana, Visva Bharati, Santiniketan, Bolpur, India.
P K SahooDepartment of Biotechnology, Siksha Vhabana, Visva Bharati, Santiniketan, Bolpur, India.
N R ChattopadhyayDepartment of Biotechnology, Siksha Vhabana, Visva Bharati, Santiniketan, Bolpur, India.
K ChatterjeeDepartment of Biotechnology, Siksha Vhabana, Visva Bharati, Santiniketan, Bolpur, India.
C N KunduDivision of Infectious Disease Biology, Institute of Life Sciences, Bhubaneswar, India.
A K DasDr B. Borooah Cancer Institute, ENT Department, Guwahati, Assam, India.
R KannanCachar Cancer Hospital & Research Centre, Silchar, Assam, India.
ZorenpuiiCivil Hospital, Aizawl, Mizoram, India.
E ZomawiaCivil Hospital, Aizawl, Mizoram, India.
S A SemaDepartment of Radiation Oncology, Civil Hospital, Dimapur, Nagaland, India.
Y I SinghRegional Institute of Medical Sciences, Department of Radiotherapy, Imphal, Manipur, India.
S K GhoshDepartment of Biotechnology, Assam Central University, Silchar, India.
K SharmaGuwahati Medical College & Hospital, Guwahati, Assam, India.
B S DasDivision of Infectious Disease Biology, Institute of Life Sciences, Bhubaneswar, India.
T ChoudhuriDivision of Infectious Disease Biology, Institute of Life Sciences, Bhubaneswar, India.
Institute of Life Sciences · INVisva-Bharati University · INAizawl Adventist Hospital · INBhubaneswar Borooah Cancer Institute · INAssam University · INGauhati Medical College and Hospital · INKIIT University · INNational Institute for Research in Tribal Health · INRegional Institute of Medical Sciences · INSilchar Medical College and Hospital · INSriram Chandra Bhanja Medical College Hospital · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tumor suppressor p53 is a critical player in the fight against cancer as it controls the cell cycle check point, apoptotic pathways and genomic stability. It is known to be the most frequently mutated gene in a wide variety of human cancers. Single-nucleotide polymorphism of p53 at codon72 leading to substitution of proline (Pro) in place of arginine (Arg) has been identified as a risk factor for development of many cancers, including nasopharyngeal carcinoma (NPC). However, the association of this polymorphism with NPC across the published literature has shown conflicting results. We aimed to conduct a case-control study for a possible relation of p53 codon72 Arg>Pro polymorphism with NPC risk in underdeveloped states of India, combine the result with previously available records from different databases and perform a meta-analysis to draw a more definitive conclusion. A total of 70 NPC patients and 70 healthy controls were enrolled from different hospitals of north-eastern India. The p53 codon72 Arg>Pro polymorphism was typed by polymerase chain reaction, which showed an association with NPC risk. In the meta-analysis consisting of 1842 cases and 2330 controls, it was found that individuals carrying the Pro allele and the ProPro genotype were at a significantly higher risk for NPC as compared with those with the Arg allele and the ArgArg genotype, respectively. Individuals with a ProPro genotype and a combined Pro genotype (ProPro+ArgPro) also showed a significantly higher risk for NPC over a wild homozygote ArgArg genotype. Additionally, the strength of each study was tested by power analysis and genotype distribution by Hardy-Weinberg equilibrium. The outcome of the study indicated that both allele frequency and genotype distribution of p53 codon72 Arg>Pro polymorphism were significantly associated with NPC risk. Stratified analyses based on ethnicity and source of samples supported the above result.

Identifiers

PMID27159678
PMCPMC4945748
OpenAlexW2347049465

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.