Evidence map›Paper›PMID 27159277›Full record

ArticlePloS one2016

Comparative Transcriptome Analysis Reveals Different Silk Yields of Two Silkworm Strains.

Juan Li, Sheng Qin, Huanjun Yu, Jing Zhang, Na Liu, Ye Yu, Chengxiang Hou, Muwang Li

Abstract readComparative Study
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

8 authors.

Juan LiSchool of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang Jiangsu 212018, China.
Sheng QinSchool of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang Jiangsu 212018, China.
Huanjun YuSchool of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang Jiangsu 212018, China.
Jing ZhangSchool of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang Jiangsu 212018, China.
Na LiuSchool of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang Jiangsu 212018, China.
Ye YuSchool of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang Jiangsu 212018, China.
Chengxiang HouSchool of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang Jiangsu 212018, China.
Muwang LiSchool of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang Jiangsu 212018, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cocoon and silk yields are the most important characteristics of sericulture. However, few studies have examined the genes that modulate these features. Further studies of these genes will be useful for improving the products of sericulture. JingSong (JS) and Lan10 (L10) are two strains having significantly different cocoon and silk yields. In the current study, RNA-Seq and quantitative polymerase chain reaction (qPCR) were performed on both strains in order to determine divergence of the silk gland, which controls silk biosynthesis in silkworms. Compared with L10, JS had 1375 differentially expressed genes (DEGs; 738 up-regulated genes and 673 down-regulated genes). Nine enriched gene ontology (GO) terms were identified by GO enrichment analysis based on these DEGs. KEGG enrichment analysis results showed that the DEGs were enriched in three pathways, which were mainly associated with the processing and biosynthesis of proteins. The representative genes in the enrichment pathways and ten significant DEGs were further verified by qPCR, the results of which were consistent with the RNA-Seq data. Our study has revealed differences in silk glands between the two silkworm strains and provides a perspective for understanding the molecular mechanisms determining silk yield.

Indexed as

TranscriptomeAnimalsBombyxSpecies Specificity

Identifiers

PMID27159277
PMCPMC4861282

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