Evidence map›Paper›PMID 27153923›Full record

ArticleJournal of the American Society of Nephrology : JASN2016

Deletion of ADP Ribosylation Factor-Like GTPase 13B Leads to Kidney Cysts.

Yuanyuan Li, Xin Tian, Ming Ma, Stephanie Jerman, Shanshan Kong, Stefan Somlo, Zhaoxia Sun

Abstract read
In one paragraph

Article in Journal of the American Society of Nephrology : JASN, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
4.5field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 58 citations in OpenAlex.

  1. Article
  2. Article
  3. ARL13B-Cerulean rescuesbioRxiv : the preprint server for biology · 2025
    Article
  4. Histone deacetylases and their inhibitors in kidney diseases.Molecular therapy : the journal of the American Society of Gene Therapy · 2025
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Computational study of biomechanical drivers of renal cystogenesis.Biomechanics and modeling in mechanobiology · 2023
    Article
  14. Inactivation ofeLife · 2023
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Yuanyuan LiDepartments of *Genetics and.
Xin TianInternal Medicine, Yale University School of Medicine, New Haven, Connecticut.
Ming MaInternal Medicine, Yale University School of Medicine, New Haven, Connecticut.
Stephanie JermanDepartments of *Genetics and.
Shanshan KongDepartments of *Genetics and.
Stefan SomloDepartments of *Genetics and.
Zhaoxia SunDepartments of *Genetics and zhaoxia.sun@yale.edu.
Yale University · US

Funding

Yale Liver CenterP30DK034989 · NIDDK · YALE UNIVERSITY · PI YASUKO IWAKIRI · 1986 to 2026
$31.1M
Renal Physiology and Phenotyping CoreP30DK079310 · NIDDK · YALE UNIVERSITY · PI ARONSON, PETER S. · 2008 to 2022
$16.8M
Yale Mouse Metabolic Phenotyping CenterU24DK059635 · NIDDK · YALE UNIVERSITY · PI SHULMAN, GERALD I · 2001 to 2015
$8.9M
Training Program in Investigative HepatologyT32DK007356 · NIDDK · YALE UNIVERSITY · PI MICHAEL H NATHANSON · 1986 to 2026
$7.4M
Center for Polycystic Kidney Disease Research at YaleP30DK090744 · NIDDK · YALE UNIVERSITY · PI CAPLAN, MICHAEL J. · 2010 to 2014
$5.6M
MOUSE MODELS OF POLYCYSTIC KIDNEY DISEASE (PKD2)R01DK054053 · NIDDK · YESHIVA UNIVERSITY · PI SOMLO, STEFAN · 1998 to 2015
$3.2M
Intraciliary calcium directs cardiac left-right asymmetryR01HL125885 · NHLBI · YALE UNIVERSITY · PI BRUECKNER, MARTINA, SUN, ZHAOXIA · 2015 to 2018
$2.3M
Function of Ruvbl1-Ruvbl2 in dynein arm assembly in motile ciliated epithelial cellsR01HL175156 · NHLBI · YALE UNIVERSITY · PI ZHAOXIA SUN · 2024 to 2026
$2.1M
Mechanisms of Polycystin and Cilia Function in ADPKDR01DK100592 · NIDDK · YALE UNIVERSITY · PI SOMLO, STEFAN · 2013 to 2017
$1.8M
Investigate kidney cyst formation and a cilia-mediated signaling networkR01DK092808 · NIDDK · YALE UNIVERSITY · PI SUN, ZHAOXIA · 2012 to 2015
$1.4M
NHLBI NIH HHS R01 HL125885NHLBI NIH HHS R01 HL175156NIDDK NIH HHS P30 DK034989NIDDK NIH HHS P30 DK079310NIDDK NIH HHS P30 DK090744NIDDK NIH HHS R01 DK054053NIDDK NIH HHS R01 DK092808NIDDK NIH HHS R01 DK100592NIDDK NIH HHS T32 DK007356NIDDK NIH HHS U24 DK059635
6 · The paper itself

Abstract

The gene for ADP ribosylation factor-like GTPase 13B (Arl13b) encodes a small GTPase essential for cilia biogenesis in multiple model organisms. Inactivation of arl13b in zebrafish leads to a number of phenotypes indicative of defective cilia, including cystic kidneys. In mouse, null mutation in Arl13b results in severe patterning defects in the neural tube and defective Hedgehog signaling. Human mutations of ARL13B lead to Joubert syndrome, a ciliopathy. However, patients with mutated ARL13B do not develop kidney cysts. To investigate whether Arl13b has a role in ciliogenesis in mammalian kidney and whether loss of function of Arl13b leads to cystic kidneys in mammals, we generated a mouse model with kidney-specific conditional knockout of Arl13b Deletion of Arl13b in the distal nephron at the perinatal stage led to a cilia biogenesis defect and rapid kidney cyst formation. Additionally, we detected misregulation of multiple pathways in the cystic kidneys of this model. Moreover, valproic acid, a histone deacetylase inhibitor that we previously showed slows cyst progression in a mouse cystic kidney model with neonatal inactivation of Pkd1, inhibited the early rise of Wnt7a expression, ameliorated fibrosis, slowed cyst progression, and improved kidney function in the Arl13b mutant mouse. Finally, in rescue experiments in zebrafish, all ARL13B allele combinations identified in patients with Joubert syndrome provided residual Arl13b function, supporting the idea that the lack of cystic kidney phenotype in human patients with ARL13B mutations is explained by the hypomorphic nature of the mutations.

Indexed as

Gene DeletionMutationAbnormalities, MultipleADP-Ribosylation FactorsAnimalsCerebellumEye AbnormalitiesHumansKidney Diseases, CysticMiceRetinaZebrafishADP-Ribosylation FactorsArl13b protein, mousepolycystic kidney diseaserenal fibrosissignaling

Identifiers

PMID27153923
PMCPMC5118478
OpenAlexW2346651882

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.