Evidence map›Paper›PMID 27153323›Full record

ArticlePloS one2016

Biochemical Analyses of Sorghum Varieties Reveal Differential Responses to Drought.

Chukwuma C Ogbaga, Piotr Stepien, Beth C Dyson, Nicholas J W Rattray, David I Ellis, Royston Goodacre, Giles N Johnson

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
10.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 56 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Physiological and Transcriptional Analysis Reveals the Response Mechanism ofInternational journal of molecular sciences · 2022
    Article
  6. Review
  7. Review
  8. Review
  9. Article
  10. Review
  11. Review
  12. Metabolomic Study of Sorghum (Journal of agricultural and food chemistry · 2021
    Article
  13. Review
  14. Distinct Preflowering Drought Tolerance Strategies ofInternational journal of molecular sciences · 2020
    Article
  15. Review
  16. Article
  17. Review
  18. Article
  19. Crop metabolomics: from diagnostics to assisted breeding.Metabolomics : Official journal of the Metabolomic Society · 2018
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Chukwuma C OgbagaThe University of Manchester, Faculty of Life Sciences, Oxford Road, Manchester, United Kingdom.
Piotr StepienThe University of Manchester, Faculty of Life Sciences, Oxford Road, Manchester, United Kingdom.
Beth C DysonThe University of Manchester, Faculty of Life Sciences, Oxford Road, Manchester, United Kingdom.
Nicholas J W RattrayManchester Institute of Biotechnology, School of Chemistry, University of Manchester, United Kingdom.
David I EllisManchester Institute of Biotechnology, School of Chemistry, University of Manchester, United Kingdom.
Royston GoodacreManchester Institute of Biotechnology, School of Chemistry, University of Manchester, United Kingdom.
Giles N JohnsonThe University of Manchester, Faculty of Life Sciences, Oxford Road, Manchester, United Kingdom.
University of Manchester · GBWroclaw University of Environmental and Life Sciences · PL

Funding

Biotechnology and Biological Sciences Research Council BB/J004103/1
6 · The paper itself

Abstract

We have examined the biochemical responses of two sorghum cultivars of differing drought tolerance, Samsorg 17 (more drought tolerant) and Samsorg 40 (less drought tolerant), to sustained drought. Plants were exposed to different degrees of drought and then maintained at that level for five days. Responses were examined in terms of metabolic changes and the expression of drought induced proteins-Heat Shock Proteins (HSPs) and dehydrins (DHNs). Generalised phenotypic changes were studied using Fourier transform infrared (FT-IR) Spectroscopy and non-targeted Gas Chromatography Mass Spectrometry (GC-MS) was employed to detect changes in metabolites, while changes in protein expression were examined using Western blot analysis. Different response profiles of metabolites, HSPs and DHNs were observed in the two cultivars. Metabolic changes involved variation in amino acids, polysaccharides and their derivatives. A total of 188 compounds, with 142 known metabolites and 46 unknown small molecules, were detected in the two sorghum varieties. Under water deficit conditions, Samsorg 17 accumulated sugars and sugar alcohols, while in Samsorg 40 amino acids increased in concentration. This study suggest that the two Sorghum varieties adopt distinct approaches in response to drought, with Samsorg 17 being better able to maintain leaf function under severe drought conditions.

Indexed as

DroughtsAdaptation, PhysiologicalGas Chromatography-Mass SpectrometryGlucoseHeat-Shock ProteinsSorghumSpectroscopy, Fourier Transform InfraredSucroseGlucoseHeat-Shock ProteinsSucrose

Identifiers

PMID27153323
PMCPMC4859509
OpenAlexW2347070643

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.