Evidence map›Paper›PMID 27153211›Full record

ArticleDNA repair2016

RAD51 variant proteins from human lung and kidney tumors exhibit DNA strand exchange defects.

Michelle C Silva, Milagros D Morrical, Katie E Bryan, April M Averill, Julie Dragon, Jeffrey P Bond, Scott W Morrical

Open access · greenAbstract read
In one paragraph

Article in DNA repair, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Review
  3. Annual review of genetics · 2020
    Review
  4. Variants of the humanMicrobial cell (Graz, Austria) · 2020
    Article
  5. Article
  6. Review
  7. Review
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Michelle C SilvaDepartment of Biochemistry, University of Vermont College of Medicine, Burlington, VT 05405, United States.
Milagros D MorricalDepartment of Biochemistry, University of Vermont College of Medicine, Burlington, VT 05405, United States.
Katie E BryanDepartment of Biochemistry, University of Vermont College of Medicine, Burlington, VT 05405, United States.
April M AverillDepartment of Microbiology & Molecular Genetics, University of Vermont College of Medicine, Burlington, VT, 05405 United States.
Julie DragonDepartment of Microbiology & Molecular Genetics, University of Vermont College of Medicine, Burlington, VT, 05405 United States.
Jeffrey P BondDepartment of Microbiology & Molecular Genetics, University of Vermont College of Medicine, Burlington, VT, 05405 United States; University of Vermont Cancer Center, University of Vermont College of Medicine, Burlington, VT 05405 United States.
Scott W MorricalDepartment of Biochemistry, University of Vermont College of Medicine, Burlington, VT 05405, United States; Department of Microbiology & Molecular Genetics, University of Vermont College of Medicine, Burlington, VT, 05405 United States; University of Vermont Cancer Center, University of Vermont College of Medicine, Burlington, VT 05405 United States. Electronic address: smorrica@uvm.edu.
University of Vermont · US

Funding

SUBSTRATE SPECIFICITY OF THE BER OXIDATIVE DNA GLYCOSYLASESP01CA098993 · NCI · UNIVERSITY OF VERMONT &ST AGRIC COLLEGE · PI DOUBLIE, SYLVIE · 2004 to 2021
$25.9M
NCI NIH HHS P01 CA098993
6 · The paper itself

Abstract

In human cells, error-free repair of DNA double-strand breaks requires the DNA pairing and strand exchange activities of RAD51 recombinase. Activation of RAD51 recombination activities requires the assembly of RAD51 presynaptic filaments on the single-stranded DNA that forms at resected DSB ends. Mutations in proteins that control presynaptic filament assembly, such as BRCA2, and in RAD51 itself, are associated with human breast cancer. Here we describe the properties of two mutations in RAD51 protein that derive from human lung and kidney tumors, respectively. Sequence variants Q268P and Q272L both map to the DNA binding loop 2 (L2) region of RAD51, a motif that is involved in DNA binding and in the allosteric activation of ATP hydrolysis and DNA strand exchange activities. Both mutations alter the thermal stability, DNA binding, and ATPase properties of RAD51, however both variants retain intrinsic DNA strand exchange activity towards oligonucleotide substrates under optimized conditions. In contrast, both Q268P and Q272L variants exhibit drastically reduced DNA strand exchange activity in reaction mixtures containing long homologous ssDNA and dsDNA substrates and human RPA protein. Mixtures of wild-type and variant proteins also exhibit reduced DNA strand exchange activity, suggesting that heterozygous mutations could negatively affect DNA recombination and repair processes in vivo. Together, the findings of this study suggest that hypomorphic missense mutations in RAD51 protein could be drivers of genomic instability in cancer cells, and thereby contribute to the etiology of metastatic disease.

Indexed as

Mutation, MissenseDNAFemaleHumansKidney NeoplasmsLung NeoplasmsMiddle AgedModels, MolecularProtein ConformationProtein StabilityRad51 RecombinaseTemperatureDNARad51 RecombinaseCancerHomology-directed repairPresynaptic filamentRAD51RecombinationVariant

Identifiers

PMID27153211
PMCPMC4884548
OpenAlexW2343448628

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.