Evidence map›Paper›PMID 27152967›Full record

ArticlePloS one2016

Emergent Network Topology within the Respiratory Rhythm-Generating Kernel Evolved In Silico.

Amit Lal, Yoshitaka Oku, Hiroshi Someya, Fumikazu Miwakeichi, Yoshiyasu Tamura

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Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

5 authors.

Amit LalDepartment of Biomedical Engineering, Peking University, Beijing, 100871 P. R. China.
Yoshitaka OkuDepartment of Physiology, Hyogo College of Medicine, Nishinomiya, 663-8501 Japan.
Hiroshi SomeyaSchool of Information Science and Technology, Tokai University, Hiratsuka, 259-1292 Japan.
Fumikazu MiwakeichiDepartment of Statistical Modeling, The Institute of Statistical Mathematics, Tachikawa, 190-8562 Japan.
Yoshiyasu TamuraDepartment of Statistical Modeling, The Institute of Statistical Mathematics, Tachikawa, 190-8562 Japan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We hypothesize that the network topology within the pre-Bötzinger Complex (preBötC), the mammalian respiratory rhythm generating kernel, is not random, but is optimized in the course of ontogeny/phylogeny so that the network produces respiratory rhythm efficiently and robustly. In the present study, we attempted to identify topology of synaptic connections among constituent neurons of the preBötC based on this hypothesis. To do this, we first developed an effective evolutionary algorithm for optimizing network topology of a neuronal network to exhibit a 'desired characteristic'. Using this evolutionary algorithm, we iteratively evolved an in silico preBötC 'model' network with initial random connectivity to a network exhibiting optimized synchronous population bursts. The evolved 'idealized' network was then analyzed to gain insight into: (1) optimal network connectivity among different kinds of neurons-excitatory as well as inhibitory pacemakers, non-pacemakers and tonic neurons-within the preBötC, and (2) possible functional roles of inhibitory neurons within the preBötC in rhythm generation. Obtained results indicate that (1) synaptic distribution within excitatory subnetwork of the evolved model network illustrates skewed/heavy-tailed degree distribution, and (2) inhibitory subnetwork influences excitatory subnetwork primarily through non-tonic pacemaker inhibitory neurons. Further, since small-world (SW) network is generally associated with network synchronization phenomena and is suggested as a possible network structure within the preBötC, we compared the performance of SW network with that of the evolved model network. Results show that evolved network is better than SW network at exhibiting synchronous bursts.

Indexed as

AlgorithmsAnimalsComputer SimulationNerve NetRespiratory Center

Identifiers

PMID27152967
PMCPMC4859517

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.