Evidence map›Paper›PMID 27152937›Full record

ArticleThe ISME journal2016

Exopolysaccharide microchannels direct bacterial motility and organize multicellular behavior.

James E Berleman, Marcin Zemla, Jonathan P Remis, Hong Liu, Annie E Davis, Alexandra N Worth, Zachary West, Angela Zhang, Hanwool Park, Elena Bosneaga and 4 more

Open access · hybridAbstract read
In one paragraph

Article in The ISME journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 42 citations in OpenAlex.

  1. Article
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  3. Whole-Genome Sequence ofMicrobiology resource announcements · 2023
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  4. Genome analysis of a plasmid-bearing myxobacterimFrontiers in microbiology · 2023
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  6. A serralysin-like protein ofFrontiers in microbiology · 2022
    Article
  7. Complete Genome Sequence ofMicrobiology resource announcements · 2021
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Chemical Transfers Occurring ThroughFrontiers in nutrition · 2019
    Article
  14. Article
  15. Exopolysaccharide protectsProceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  16. Review
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 2 countries.

James E BerlemanLife Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Marcin ZemlaLife Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Jonathan P RemisLife Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Hong LiuDepartment of Molecular and Cell Biology, University of California, Berkeley, CA, USA.
Annie E DavisDepartment of Molecular and Cell Biology, University of California, Berkeley, CA, USA.
Alexandra N WorthLife Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Zachary WestLife Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Angela ZhangLife Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Hanwool ParkDepartment of Molecular and Cell Biology, University of California, Berkeley, CA, USA.
Elena BosneagaLife Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Brandon van LeerFEI, Inc, Hillsboro, OR, USA.
Wenting TsaiLife Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
David R ZusmanDepartment of Molecular and Cell Biology, University of California, Berkeley, CA, USA.
Manfred AuerLife Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Lawrence Berkeley National Laboratory · USUniversity of California, Berkeley · USState Key Laboratory of Microbial Technology

Funding

TUBULIN STRUCTURE BY ELECTRON CRYSTALLOGRAPHYP01GM051487 · NIGMS · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI CATE, JAMIE H · 1994 to 2018
$27.6M
SENSORY TRANSDUCTION AND DEVELOPMENT IN A BACTERIUMR01GM020509 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI ZUSMAN, DAVID ROBERT · 1985 to 2014
$5.9M
NIGMS NIH HHS P01 GM051487NIGMS NIH HHS R01 GM020509
6 · The paper itself

Abstract

The myxobacteria are a family of soil bacteria that form biofilms of complex architecture, aligned multilayered swarms or fruiting body structures that are simple or branched aggregates containing myxospores. Here, we examined the structural role of matrix exopolysaccharide (EPS) in the organization of these surface-dwelling bacterial cells. Using time-lapse light and fluorescence microscopy, as well as transmission electron microscopy and focused ion beam/scanning electron microscopy (FIB/SEM) electron microscopy, we found that Myxococcus xanthus cell organization in biofilms is dependent on the formation of EPS microchannels. Cells are highly organized within the three-dimensional structure of EPS microchannels that are required for cell alignment and advancement on surfaces. Mutants lacking EPS showed a lack of cell orientation and poor colony migration. Purified, cell-free EPS retains a channel-like structure, and can complement EPS

Indexed as

Bacterial ProteinsBiofilmsCell MembraneMyxococcus xanthusPolysaccharides, BacterialBacterial ProteinsPolysaccharides, Bacterial

Identifiers

PMID27152937
PMCPMC5113850
OpenAlexW2347088987

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.