Evidence map›Paper›PMID 27151922›Full record

ArticleJournal of the American Society of Nephrology : JASN2017

Exome Sequencing Discerns Syndromes in Patients from Consanguineous Families with Congenital Anomalies of the Kidneys and Urinary Tract.

Asaf Vivante, Daw-Yang Hwang, Stefan Kohl, Jing Chen, Shirlee Shril, Julian Schulz, Amelie van der Ven, Ghaleb Daouk, Neveen A Soliman, Aravind Selvin Kumar and 4 more

Open access · greenAbstract read
In one paragraph

Article in Journal of the American Society of Nephrology : JASN, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 55 papers.

0numbers the graph read from it
0cells of the map it votes in
55citing papers in PubMed
6.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

55 citing papers in PubMed, 97 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Review
  12. The genetics and pathogenesis of CAKUT.Nature reviews. Nephrology · 2023
    Review
  13. Recessive CHRM5 variant as a potential cause of neurogenic bladder.American journal of medical genetics. Part A · 2023
    Article
  14. Neurogenic Defects Occur inKidney international reports · 2023
    Article
  15. Article
  16. Article
  17. Definition, diagnosis and clinical management of non-obstructive kidney dysplasia: a consensus statement by the ERKNet Working Group on Kidney Malformations.Nephrology, dialysis, transplantation : official publication of the European Dialysis and Transplant Association - European Renal Association · 2022
    Article
  18. The term CAKUT has outlived its usefulness: the case for the defense.Pediatric nephrology (Berlin, Germany) · 2022
    Review
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 7 countries.

Asaf VivanteDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts.
Daw-Yang HwangDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts.
Stefan KohlDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts.
Jing ChenDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts.
Shirlee ShrilDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts.
Julian SchulzDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts.
Amelie van der VenDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts.
Ghaleb DaoukDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts.
Neveen A SolimanDepartment of Pediatrics, Kasr Al Ainy School of Medicine, Cairo University, Cairo, Egypt.
Aravind Selvin KumarPediatric Nephrology Department, Institute of Child Health and Hospital for Children, Chennai, Tamil Nadu, India.
Prabha SenguttuvanPediatric Nephrology Department, Institute of Child Health and Hospital for Children, Chennai, Tamil Nadu, India.
Elijah O KehindeDivision of Urology, Department of Surgery, Kuwait University, Safat, Kuwait.
Velibor TasicMedical Faculty Skopje, University Children's Hospital, Skopje, Macedonia; and.
Friedhelm HildebrandtDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts; friedhelm.hildebrandt@childrens.harvard.edu.
Harvard University · USBoston Children's Hospital · USInstitute of Child Health · INCairo University · EGKuwait University · KW

Funding

New genes and pathomechanisms of congenital abnormalities of the kidney (CAKUT)R01DK088767 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI HILDEBRANDT, FRIEDHELM · 2010 to 2019
$3.4M
NIDDK NIH HHS R01 DK088767
6 · The paper itself

Abstract

Congenital anomalies of the kidneys and urinary tract (CAKUT) are the leading cause of CKD in children, featuring a broad variety of malformations. A monogenic cause can be detected in around 12% of patients. However, the morphologic clinical phenotype of CAKUT frequently does not indicate specific genes to be examined. To determine the likelihood of detecting causative recessive mutations by whole-exome sequencing (WES), we analyzed individuals with CAKUT from 33 different consanguineous families. Using homozygosity mapping and WES, we identified the causative mutations in nine of the 33 families studied (27%). We detected recessive mutations in nine known disease-causing genes: ZBTB24, WFS1, HPSE2, ATRX, ASPH, AGXT, AQP2, CTNS, and PKHD1 Notably, when mutated, these genes cause multiorgan syndromes that may include CAKUT as a feature (syndromic CAKUT) or cause renal diseases that may manifest as phenocopies of CAKUT. None of the above monogenic disease-causing genes were suspected on clinical grounds before this study. Follow-up clinical characterization of those patients allowed us to revise and detect relevant new clinical features in a more appropriate pathogenetic context. Thus, applying WES to the diagnostic approach in CAKUT provides opportunities for an accurate and early etiology-based diagnosis and improved clinical management.

Indexed as

MutationExomeHumansPhenotypeSyndromeUrogenital AbnormalitiesVesico-Ureteral RefluxCAKUTmonogenic diseaseWES

Identifiers

PMID27151922
PMCPMC5198271
OpenAlexW2345421927

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.