Evidence map›Paper›PMID 27151791›Full record

ArticleGenome announcements2016

Genome Sequence of Ustilaginoidea virens IPU010, a Rice Pathogenic Fungus Causing False Smut.

Toshitaka Kumagai, Tomoko Ishii, Goro Terai, Myco Umemura, Masayuki Machida, Kiyoshi Asai

Open access · diamondAbstract read
In one paragraph

Article in Genome announcements, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
4.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 24 citations in OpenAlex.

  1. Review
  2. Article
  3. Comparative genomics of Eastern-IndianFrontiers in fungal biology · 2026
    Article
  4. Review
  5. Article
  6. A Genome-Wide Comparison of Rice False Smut FungusInternational journal of molecular sciences · 2023
    Article
  7. Article
  8. Article
  9. A Novel Effector GeneFrontiers in microbiology · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Toshitaka KumagaiFermlab Inc., Koto-ku, Tokyo, Japan Technology Research Association of Highly Efficient Gene Design, Sapporo, Hokkaido, Japan.
Tomoko IshiiTechnology Research Association of Highly Efficient Gene Design, Sapporo, Hokkaido, Japan.
Goro TeraiTechnology Research Association of Highly Efficient Gene Design, Sapporo, Hokkaido, Japan INTEC Inc., Koto-ku, Tokyo, Japan.
Myco UmemuraTechnology Research Association of Highly Efficient Gene Design, Sapporo, Hokkaido, Japan Bioproduction Research Institute, National Institute of Advanced Industrial Science and Technology (AIST), Sapporo, Hokkaido, Japan umemura-m@aist.go.jp.
Masayuki MachidaTechnology Research Association of Highly Efficient Gene Design, Sapporo, Hokkaido, Japan Bioproduction Research Institute, National Institute of Advanced Industrial Science and Technology (AIST), Sapporo, Hokkaido, Japan.
Kiyoshi AsaiTechnology Research Association of Highly Efficient Gene Design, Sapporo, Hokkaido, Japan Department of Computational Biology and Medical Sciences, Graduate School of Frontier Sciences, University of Tokyo, Kashiwa, Chiba, Japan.
Photonics Electronics Technology Research Association · JPNational Institute of Advanced Industrial Science and Technology · JPThe University of Tokyo · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ustilaginoidea virens is a rice pathogenic fungus that causes false smut disease, a disease that seriously damages the yield and quality of the grain. Analysis of the U. virens IPU010 33.6-Mb genome sequence will aid in the understanding of the pathogenicity of the strain, particularly in regard to effector proteins and secondary metabolic genes.

Identifiers

PMID27151791
PMCPMC4859173
OpenAlexW2345850543

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.