Evidence map›Paper›PMID 27150259›Full record

ArticleBMC research notes2016

Isolation and identification of group A rotaviruses among neonatal diarrheic calves, Morocco.

Imane Ennima, Ghizlane Sebbar, Bachir Harif, Saaid Amzazi, Chafiqa Loutfi, Nadia Touil

Open access · goldAbstract read
In one paragraph

Article in BMC research notes, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.7field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Imane EnnimaLaboratory of Biochemistry and Immunology, Department of Biology, Faculty of Sciences, 4 Avenue Ibn Batouta, B.P. 1014 RP, Rabat, Morocco. Ennima.imane@gmail.com.
Ghizlane SebbarSociété de Productions des Produits Biologiques & Vétérinaires, Avenue Hassan II, 10051, Rabat, Morocco.
Bachir HarifSociété de Productions des Produits Biologiques & Vétérinaires, Avenue Hassan II, 10051, Rabat, Morocco.
Saaid AmzaziLaboratory of Biochemistry and Immunology, Department of Biology, Faculty of Sciences, 4 Avenue Ibn Batouta, B.P. 1014 RP, Rabat, Morocco.
Chafiqa LoutfiSociété de Productions des Produits Biologiques & Vétérinaires, Avenue Hassan II, 10051, Rabat, Morocco.
Nadia TouilEquipe de Recherche en Virologie Moléculaire et Onco-Biologie, Faculté de Médecine et de Pharmacie, Université Mohamed V, Av. Mohamed Belarbi El Alaoui, Rabat, Morocco. ntouil2003@gmail.com.
Institut Agronomique et Vétérinaire Hassan II · MALaboratoire de Biochimie · FRMohamed I University · MA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundGroup A rotaviruses (RVA) are the main cause of neonatal calve diarrhea (NCD) in Morocco. In this study, we isolated RVA strains from NCD clinical samples in order to support RVA disease control in Morocco. This isolation process constitutes a first step toward vaccine development.

methodsThirteen fecal samples were obtained from calves with a single episode of neonate calf diarrhea at three different dairies and two samples were collected from field during a severe NCD outbreak. Diagnosis of RVA infection was based on fecal immune-chromatographic rapid test and further evaluated for their hemagglutination (HA) activity. RVA isolation was carried out on MA104 cells after inoculates were treated with different concentrations of trypsin TPCK. All RVA isolates were confirmed by LSI VetMAX™ Triplex Ruminant Rotavirus & Coronavirus Real-Time PCR kit. G and P typing were determined by direct sequencing of the VP4 and VP7 amplicons.

resultsRVA isolation was achieved for nine clinical samples following one or two passages (60 %) and was properly depended on HA activity and trypsin treatment of inoculates. The first sign of CPE detected consisted of increased cell granularity, obscure cell boundaries, cell rounding, and eventual degeneration and detachment of cells. At lower TPCK concentration (3-10 μg/inoculum), no changes at the cellular level were observed, while cells activated with 25-30 μg of trypsin/inoculums, they degenerated and trypsin cytotoxicity was enhanced. Appreciable changes in cell's morphology were detected with optimal trypsin concentration of 15-20 μg trypsin/inoculums. Data from qRT-PCR confirmed that unsuccessful cultivations have No-Ct, and all nine isolates have Ct values ranged between 12.17 and 24.69. Analysis sequencing revealed that field isolates were of G6 P[5] serotype and isolates from the dairy NCD samples were of G10 P[14] serotype.

conclusionsTo our knowledge, this is the first study in Morocco which reports the circulation of G10P[14] in NCD on dairy farms and G6P[5] in the field. Our study constitutes a crucial and a necessary step allowing preventive and veterinary medicine to support RVA disease controls in the country.

Indexed as

Animals, NewbornAnimalsCattleCell LineDiarrheaHumansMacaca mulattaMoroccoRotavirus InfectionsBovine rotavirusG10 P[14]G6 P[5]IsolationMorocco

Identifiers

PMID27150259
PMCPMC4858901
OpenAlexW2346082084

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.