Evidence map›Paper›PMID 27149923›Full record

ArticleJournal of cell science2017

A toolbox to study epidermal cell types in zebrafish.

George T Eisenhoffer, Gloria Slattum, Oscar E Ruiz, Hideo Otsuna, Chase D Bryan, Justin Lopez, Daniel S Wagner, Joshua L Bonkowsky, Chi-Bin Chien, Richard I Dorsky and 1 more

Open access · greenAbstract read
In one paragraph

Article in Journal of cell science, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed, 1 pooled it
2.3field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 1 synthesis or guideline pooled it, 57 citations in OpenAlex.

  1. Pooled it
  2. Spatially structured inflammatory response in the presence of a uniform stimulus.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
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  4. Article
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  7. Parasitic fish embryos do a "front-flip" on the yolk to resist expulsion from the host.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  8. Review
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  13. Review
  14. Review
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  18. The conundrum of pharyngeal teeth origin: the role of germ layers, pouches, and gill slits.Biological reviews of the Cambridge Philosophical Society · 2022
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

George T EisenhofferDepartment of Genetics, The University of Texas MD Anderson Cancer Center, Unit 1010, 1515 Holcombe Blvd., Houston, TX 77030-4009, USA gteisenhoffer@mdanderson.org jody.rosenblatt@hci.utah.edu.ORCID 0000-0003-0188-6782
Gloria SlattumDepartment of Oncological Sciences, Huntsman Cancer Institute, University of Utah, 2000 Circle of Hope Drive, Salt Lake City, UT 84112, USA.
Oscar E RuizDepartment of Genetics, The University of Texas MD Anderson Cancer Center, Unit 1010, 1515 Holcombe Blvd., Houston, TX 77030-4009, USA.
Hideo OtsunaDepartment of Neurobiology and Anatomy, University of Utah School of Medicine, 320 BPRB, 20 South 2030 East, Salt Lake City, UT 84112, USA.
Chase D BryanDepartment of Oncological Sciences, Huntsman Cancer Institute, University of Utah, 2000 Circle of Hope Drive, Salt Lake City, UT 84112, USA.
Justin LopezDepartment of BioSciences, Rice University, W100 George R. Brown Hall, Houston, TX 77251-1892, USA.
Daniel S WagnerDepartment of BioSciences, Rice University, W100 George R. Brown Hall, Houston, TX 77251-1892, USA.
Joshua L BonkowskyDepartment of Neurobiology and Anatomy, University of Utah School of Medicine, 320 BPRB, 20 South 2030 East, Salt Lake City, UT 84112, USA.
Chi-Bin ChienDepartment of Neurobiology and Anatomy, University of Utah School of Medicine, 320 BPRB, 20 South 2030 East, Salt Lake City, UT 84112, USA.
Richard I DorskyDepartment of Neurobiology and Anatomy, University of Utah School of Medicine, 320 BPRB, 20 South 2030 East, Salt Lake City, UT 84112, USA.
Jody RosenblattDepartment of Oncological Sciences, Huntsman Cancer Institute, University of Utah, 2000 Circle of Hope Drive, Salt Lake City, UT 84112, USA gteisenhoffer@mdanderson.org jody.rosenblatt@hci.utah.edu.
University of Utah · USRice University · USThe University of Texas MD Anderson Cancer Center · US

Funding

Tumor Evolution and Metastasis ProgramP30CA016672 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI Scott Kopetz · 1985 to 2026
$290.8M
The Role of Extrusion in Controlling Epithelial HomeostasisR01GM102169 · NIGMS · UNIVERSITY OF UTAH · PI BECKERLE, MARY C., ROSENBLATT, JODY SNOW · 2012 to 2019
$3.4M
Identification of signals that extrude an apoptotic cell from an epitheliumDP2OD002056 · OD · UNIVERSITY OF UTAH · PI ROSENBLATT, JODY SNOW · 2007 to 2007
$2.3M
Trans-Cellular Activation of Transcription to Analyze Dopaminergic Axon ReorganizDP2MH100008 · NIMH · UNIVERSITY OF UTAH · PI BONKOWSKY, JOSH LEITCH · 2012 to 2012
$2.2M
NCI NIH HHS P30 CA016672NIGMS NIH HHS R01 GM102169NIH HHS DP2 OD002056NIMH NIH HHS DP2 MH100008
6 · The paper itself

Abstract

Epithelia provide a crucial protective barrier for our organs and are also the sites where the majority of carcinomas form. Most studies on epithelia and carcinomas use cell culture or organisms where high-resolution live imaging is inaccessible without invasive techniques. Here, we introduce the developing zebrafish epidermis as an excellent in vivo model system for studying a living epithelium. We developed tools to fluorescently tag specific epithelial cell types and express genes in a mosaic fashion using five Gal4 lines identified from an enhancer trap screen. When crossed to a variety of UAS effector lines, we can now track, ablate or monitor single cells at sub-cellular resolution. Using photo-cleavable morpholino oligonucleotides that target gal4, we can also express genes in a mosaic fashion at specific times during development. Together, this system provides an excellent in vivo alternative to tissue culture cells, without the intrinsic concerns of culture conditions or transformation, and enables the investigation of distinct cell types within living epithelial tissues.

Indexed as

Epidermal CellsAnimalsCell DeathCell DivisionCrosses, GeneticCytological TechniquesDNA-Binding ProteinsEnhancer Elements, GeneticEpidermisEpithelial CellsFemaleGene Expression Regulation, DevelopmentalImaging, Three-DimensionalMaleMorpholinosTime FactorsDNA-Binding ProteinsGal4 protein, zebrafishMorpholinosTranscription FactorsZebrafish ProteinsEpitheliaIn vivoZebrafish

Identifiers

PMID27149923
PMCPMC5394773
OpenAlexW2345733750

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.