Evidence map›Paper›PMID 27149507›Full record

ArticleRNA biology2017

Transient overexpression of exogenous APOBEC3A causes C-to-U RNA editing of thousands of genes.

Shraddha Sharma, Santosh K Patnaik, Zeynep Kemer, Bora E Baysal

Open access · bronzeAbstract read
In one paragraph

Article in RNA biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 60 papers.

0numbers the graph read from it
0cells of the map it votes in
60citing papers in PubMed
4.9field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

60 citing papers in PubMed, 91 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Two codes of RNA editing by deamination in human diseases.Experimental & molecular medicine · 2026
    Review
  5. HAMMER: Hairpin-based APOBEC3A-mediated mRNA editing reporter.bioRxiv : the preprint server for biology · 2026
    Article
  6. Article
  7. Review
  8. Review
  9. Deaminase Modulation Driving a New Era in Drug Development.International journal of molecular sciences · 2025
    Review
  10. Article
  11. Review
  12. Review
  13. RNA modifications and their role in gene expression.Frontiers in molecular biosciences · 2025
    Review
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Shraddha Sharmaa Department of Pathology , Roswell Park Cancer Institute , Buffalo , NY , USA.
Santosh K Patnaikb Department of Thoracic Surgery , Roswell Park Cancer Institute , Buffalo , NY , USA.
Zeynep Kemera Department of Pathology , Roswell Park Cancer Institute , Buffalo , NY , USA.
Bora E Baysala Department of Pathology , Roswell Park Cancer Institute , Buffalo , NY , USA.
Roswell Park Comprehensive Cancer Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

APOBEC3A cytidine deaminase induces site-specific C-to-U RNA editing of hundreds of genes in monocytes exposed to hypoxia and/or interferons and in pro-inflammatory macrophages. To examine the impact of APOBEC3A overexpression, we transiently expressed APOBEC3A in HEK293T cell line and performed RNA sequencing. APOBEC3A overexpression induces C-to-U editing at more than 4,200 sites in transcripts of 3,078 genes resulting in protein recoding of 1,110 genes. We validate recoding RNA editing of genes associated with breast cancer, hematologic neoplasms, amyotrophic lateral sclerosis, Alzheimer disease and primary pulmonary hypertension. These results highlight the fundamental impact of APOBEC3A overexpression on human transcriptome by widespread RNA editing.

Indexed as

RNA EditingTranscriptomeBase SequenceCytidine DeaminaseDiseaseHEK293 CellsHumansHypoxiaInterferonsMacrophagesMonocytesProteinsRNAAPOBEC3A protein, humanCytidine DeaminaseInterferonsProteinsRNACytidine deaminasedisease genesepitranscriptomicsRNA editingRNA seq

Identifiers

PMID27149507
PMCPMC5449087
OpenAlexW2345461444

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.