Evidence map›Paper›PMID 27149272›Full record

ArticlePloS one2016

Epitope-Tagged Autotransporters as Single-Cell Reporters for Gene Expression by a Salmonella Typhimurium wbaP Mutant.

Ismeta Curkić, Monika Schütz, Philipp Oberhettinger, Médéric Diard, Manfred Claassen, Dirk Linke, Wolf-Dietrich Hardt

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.6field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Microbiology spectrum · 2019
    Review
  3. The Interplay betweenMicrobiology spectrum · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 3 countries.

Ismeta CurkićInstitute of Microbiology, Department of Biology, ETH Zürich, Zürich, Switzerland.
Monika SchützInstitute of Microbiology and Hygiene, University of Tübingen, Tübingen, Germany.
Philipp OberhettingerInstitute of Microbiology and Hygiene, University of Tübingen, Tübingen, Germany.
Médéric DiardInstitute of Microbiology, Department of Biology, ETH Zürich, Zürich, Switzerland.
Manfred ClaassenInstitute of Molecular Systems Biology, ETH Zürich, Zürich, Switzerland.
Dirk LinkeDepartment of Biosciences, EVOGENE Section, University of Oslo, Oslo, Norway.
Wolf-Dietrich HardtInstitute of Microbiology, Department of Biology, ETH Zürich, Zürich, Switzerland.
ETH Zurich · CHInstitute of Medical Microbiology and Hygiene · DEUniversity of Oslo · NO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Phenotypic diversity is an important trait of bacterial populations and can enhance fitness of the existing genotype in a given environment. To characterize different subpopulations, several studies have analyzed differential gene expression using fluorescent reporters. These studies visualized either single or multiple genes within single cells using different fluorescent proteins. However, variable maturation and folding kinetics of different fluorophores complicate the study of dynamics of gene expression. Here, we present a proof-of-principle study for an alternative gene expression system in a wbaP mutant of Salmonella Typhimurium (S. Tm) lacking the O-sidechain of the lipopolysaccharide. We employed the hemagglutinin (HA)-tagged inverse autotransporter invasin (invAHA) as a transcriptional reporter for the expression of the type three secretion system 1 (T1) in S. Tm. Using a two-reporter approach with GFP and the InvAHA in single cells, we verify that this reporter system can be used for T1 gene expression analysis, at least in strains lacking the O-antigen (wbaP), which are permissive for detection of the surface-exposed HA-epitope. When we placed the two reporters gfp and invAHA under the control of either one or two different promoters of the T1 regulon, we were able to show correlative expression of both reporters. We conclude that the invAHA reporter system is a suitable tool to analyze T1gene expression in S. Tm and propose its applicability as molecular tool for gene expression studies within single cells.

Indexed as

Gene Expression Regulation, BacterialGenes, ReporterMutationCarrier ProteinsChromosomes, BacterialEpitopesGene DeletionPlasmidsSalmonella typhimuriumCarrier ProteinsEpitopes

Identifiers

PMID27149272
PMCPMC4858243
OpenAlexW2347023951

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.