Evidence map›Paper›PMID 27148556›Full record

ArticleBio-protocol2012

Isolation of Epithelial Cells from Mouse Gastrointestinal Tract for Western Blot or RNA Analysis.

Maged Zeineldin, Kristi Neufeld

Open access · bronzeAbstract read
In one paragraph

Article in Bio-protocol, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
0.1field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
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  6. Article
  7. Frontiers in immunology · 2023
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  9. Role of CBAmerican journal of physiology. Gastrointestinal and liver physiology · 2022
    Article
  10. Frontiers in nutrition · 2022
    Article
  11. Secreted osteopontin from CD4Cell reports · 2021
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Anoctamin 1/TMEM16A controls intestinal ClExperimental & molecular medicine · 2019
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Maged ZeineldinMolecular Biosciences Department, University of Kansas, Lawrence, USA.
Kristi NeufeldMolecular Biosciences Department, University of Kansas, Lawrence, USA.
University of Kansas · US

Funding

UNDERSTANDING THE ROLE OF SMALL RNAS IN ARABIDOPSIS POLLEN DEVELOPMENTP20RR016475 · NCRR · UNIVERSITY OF KANSAS MEDICAL CENTER · PI ACKLEY, BRIAN DOUGLAS · 2001 to 2011
$38.1M
WEIGHT CONTROL, CELL SIGNALING AND CANCER PREVENTIONP20RR015563 · NCRR · UNIVERSITY OF KANSAS LAWRENCE · PI ZUFFEREY, RACHEL · 2000 to 2009
$20.1M
Nuclear functions of the tumor suppressor protein APCR01CA109220 · NCI · UNIVERSITY OF KANSAS LAWRENCE · PI NEUFELD, KRISTI L · 2004 to 2008
$1.2M
NCI NIH HHS R01 CA109220NCRR NIH HHS P20 RR015563NCRR NIH HHS P20 RR016475
6 · The paper itself

Abstract

The gastrointestinal (GI) tract is lined by a single layer of epithelial cells which function in secretion, absorption, and digestion. In addition, most GI tract tumors develop from epithelial cells (carcinomas). This protocol describes isolation of the surface epithelium from the underlying stroma, muscular layer and submucosa in the GI tract. In this protocol, epithelial cell adhesions are weekend by chelating Ca +2 ions followed by mechanical separation of the cells by vortexing. Analysis of protein levels and gene expression patterns in isolated epithelial cells versus whole GI tissue minimizes the potential for confounding contributions from contaminating stromal cells.

Identifiers

PMID27148556
PMCPMC4852866
OpenAlexW2481541928

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.