Evidence map›Paper›PMID 27148456›Full record

ArticleMicrobial genomics2015

Single molecule real-time sequencing of

Nicholas J Booher, Sara C D Carpenter, Robert P Sebra, Li Wang, Steven L Salzberg, Jan E Leach, Adam J Bogdanove

Open access · hybridAbstract read
In one paragraph

Article in Microbial genomics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
17.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 81 citations in OpenAlex.

  1. Large- and small-scale population structure ofApplied and environmental microbiology · 2025
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  6. Analysis of soft rotFrontiers in microbiology · 2024
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  8. Complete Genomic Sequence ofInternational journal of molecular sciences · 2023
    Article
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  13. Comparative Genomic Analysis of TwoFrontiers in microbiology · 2022
    Article
  14. Review
  15. Article
  16. Complete Genome Assemblies of AllFrontiers in microbiology · 2021
    Article
  17. Article
  18. Article
  19. AnFrontiers in microbiology · 2020
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 1 country.

Nicholas J BooherPlant Pathology and Plant-Microbe Biology Section, School of Integrative Plant Science, Cornell University, Ithaca, NY 14853, USA.
Sara C D CarpenterPlant Pathology and Plant-Microbe Biology Section, School of Integrative Plant Science, Cornell University, Ithaca, NY 14853, USA.
Robert P SebraIcahn Institute for Genomics and Multiscale Biology and Department of Genetics & Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.
Li WangPlant Pathology and Plant-Microbe Biology Section, School of Integrative Plant Science, Cornell University, Ithaca, NY 14853, USA.
Steven L SalzbergDepartments of Biomedical Engineering, Computer Science, and Biostatistics and Center for Computational Biology, Johns Hopkins University, Baltimore, MD 21205, USA.
Jan E LeachBioagricultural Sciences and Pest Management, Colorado State University, Fort Collins, CO 80523, USA.
Adam J BogdanovePlant Pathology and Plant-Microbe Biology Section, School of Integrative Plant Science, Cornell University, Ithaca, NY 14853, USA.
Cornell University · USColorado State University · USIcahn School of Medicine at Mount Sinai · USJohns Hopkins University · USPlant (United States) · US

Funding

Computational Methods for Genome Assembly, Transcript Assembly, and Variant DiscoveryR01HG006677 · NHGRI · JOHNS HOPKINS UNIVERSITY · PI SALZBERG, STEVEN L. · 2011 to 2025
$10.7M
NHGRI NIH HHS R01 HG006677
6 · The paper itself

Abstract

Pathogen-injected, direct transcriptional activators of host genes, TAL (transcription activator-like) effectors play determinative roles in plant diseases caused by

Indexed as

PacBiosingle molecule real-time sequencingSMRTTAL effectorswhole gene assemblyXanthomonas

Identifiers

PMID27148456
PMCPMC4853030
OpenAlexW1902152491

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.