ArticleFrontiers in plant science2016
Genome Wide SSR High Density Genetic Map Construction from an Interspecific Cross of Gossypium hirsutum × Gossypium tomentosum.
Article in Frontiers in plant science, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.
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13 citing papers in PubMed.
- Overexpression and knockdown of cottoniScience · 2024Article
- Comparative transcriptomics provides a strategy for phylogenetic analysis and SSR marker development in Chaenomeles.Scientific reports · 2021Article
- Comparative transcriptome and metabolite profiling of four tissues from Alisma orientale (Sam.) Juzep reveals its inflorescence developmental and medicinal characteristics.Scientific reports · 2019Article
- Assessment of Genetic Diversity, Population Structure, and Evolutionary Relationship of Uncharacterized Genes in a Novel Germplasm Collection of Diploid and AllotetraploidInternational journal of molecular sciences · 2018Article
- QTL delineation for five fiber quality traits based on an intra-specific Gossypium hirsutum L. recombinant inbred line population.Molecular genetics and genomics : MGG · 2018Article
- De Novo Transcriptome Assembly and Population Genetic Analyses for an Endangered Chinese EndemicGenes · 2018Article
- GBS Mapping and Analysis of Genes Conserved betweenInternational journal of molecular sciences · 2018Article
- QTL Mapping for Fiber Quality and Yield Traits Based on Introgression Lines Derived from Gossypium hirsutum × G. tomentosum.International journal of molecular sciences · 2018Article
- Article
- QTL analysis of cotton fiber length in advanced backcross populations derived from a cross between Gossypium hirsutum and G. mustelinum.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2017Article
- Article
- Putative Microsatellite DNA Marker-Based Wheat Genomic Resource for Varietal Improvement and Management.Frontiers in plant science · 2017Article
- QTL Analysis of Transgressive Nematode Resistance in Tetraploid Cotton Reveals Complex Interactions in Chromosome 11 Regions.Frontiers in plant science · 2017Article
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Abstract
A high density genetic map was constructed using F2 population derived from an interspecific cross of G. hirsutum × G. tomentosum. The map consisted of 3093 marker loci distributed across all the 26 chromosomes and covered 4365.3 cM of cotton genome with an average inter-marker distance of 1.48 cM. The maximum length of chromosome was 218.38 cM and the minimum was 122.09 cM with an average length of 167.90 cM. A sub-genome covers more genetic distance (2189.01 cM) with an average inter loci distance of 1.53 cM than D sub-genome which covers a length of 2176.29 cM with an average distance of 1.43 cM. There were 716 distorted loci in the map accounting for 23.14% and most distorted loci were distributed on D sub-genome (25.06%), which were more than on A sub-genome (21.23%). In our map 49 segregation hotspots (SDR) were distributed across the genome with more on D sub-genome as compared to A genome. Two post-polyploidization reciprocal translocations of "A2/A3 and A4/A5" were suggested by seven pairs of duplicate loci. The map constructed through these studies is one of the three densest genetic maps in cotton however; this is the first dense genome wide SSR interspecific genetic map between G. hirsutum and G. tomentosum.
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