Evidence map›Paper›PMID 27146836›Full record

ArticleJournal of translational medicine2016

Next-generation sequencing for diagnosis of thoracic aortic aneurysms and dissections: diagnostic yield, novel mutations and genotype phenotype correlations.

J K Poninska, Z T Bilinska, M Franaszczyk, E Michalak, M Rydzanicz, E Szpakowski, A Pollak, B Milanowska, G Truszkowska, P Chmielewski and 14 more

Registry-linked trialOpen access · goldAbstract read
In one paragraph

Article in Journal of translational medicine, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT04751058 (Genetic Profile in Patients With Aortic Syndrome), which is not on this map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
6.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT04751058 completednot on this mapstarted 2021, after this paper: background citation

Genetic Profile in Patients With Aortic Syndrome

TypeobservationalSponsorHospitales Universitarios Virgen del RocíoRan2021 to 2022Enrolled73ConditionsGene Abnormality, Acute Aortic SyndromeArmsgenetic analysis
3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 57 citations in OpenAlex.

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  14. Role of non-coding variants in cardiovascular disease.Journal of cellular and molecular medicine · 2023
    Review
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  20. [Gene mutation analysis of 19 Uighur families with aortic disease in Kashgar, China].Nan fang yi ke da xue xue bao = Journal of Southern Medical University · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors at 3 institutions in 1 country.

J K PoninskaMolecular Biology Laboratory, Institute of Cardiology, Warsaw, Poland.
Z T BilinskaUnit for Screening Studies in Inherited Cardiovascular Diseases, Institute of Cardiology, Warsaw, Poland. zbilinska@ikard.pl.
M FranaszczykMolecular Biology Laboratory, Institute of Cardiology, Warsaw, Poland.
E MichalakUnit for Screening Studies in Inherited Cardiovascular Diseases, Institute of Cardiology, Warsaw, Poland.
M RydzaniczDepartment of Medical Genetics, Centre of Biostructure, Medical University of Warsaw, Warsaw, Poland.
E SzpakowskiDepartment of Cardiac Surgery and Transplantation, Institute of Cardiology, Warsaw, Poland.
A PollakDepartment of Genetics, Institute of Physiology and Pathology of Hearing, Warsaw, Poland.
B MilanowskaUnit for Screening Studies in Inherited Cardiovascular Diseases, Institute of Cardiology, Warsaw, Poland.
G TruszkowskaMolecular Biology Laboratory, Institute of Cardiology, Warsaw, Poland.
P ChmielewskiUnit for Screening Studies in Inherited Cardiovascular Diseases, Institute of Cardiology, Warsaw, Poland.
A SiomaUnit for Screening Studies in Inherited Cardiovascular Diseases, Institute of Cardiology, Warsaw, Poland.
H Janaszek-SitkowskaDepartment of Hypertension, Institute of Cardiology, Warsaw, Poland.
A KlisiewiczDepartment of Congenital Cardiac Defects, Institute of Cardiology, Warsaw, Poland.
I MichalowskaDepartment of Radiology, Institute of Cardiology, Warsaw, Poland.
M Makowiecka-CieslaDepartment of Hypertension, Institute of Cardiology, Warsaw, Poland.
P KolsutDepartment of Cardiac Surgery and Transplantation, Institute of Cardiology, Warsaw, Poland.
P StawinskiDepartment of Medical Genetics, Centre of Biostructure, Medical University of Warsaw, Warsaw, Poland.
B Foss-NieradkoUnit for Screening Studies in Inherited Cardiovascular Diseases, Institute of Cardiology, Warsaw, Poland.
M SzperlMolecular Biology Laboratory, Institute of Cardiology, Warsaw, Poland.
J GrzybowskiDepartment of Cardiomyopathy, Institute of Cardiology, Warsaw, Poland.
P HoffmanDepartment of Congenital Cardiac Defects, Institute of Cardiology, Warsaw, Poland.
A JanuszewiczDepartment of Hypertension, Institute of Cardiology, Warsaw, Poland.
M KusmierczykDepartment of Cardiac Surgery and Transplantation, Institute of Cardiology, Warsaw, Poland.
R PloskiDepartment of Medical Genetics, Centre of Biostructure, Medical University of Warsaw, Warsaw, Poland. rploski@wp.pl.
Institute of Cardiology · PLInstitute of Physiology and Pathology of Hearing · PLMedical University of Warsaw · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThoracic aortic aneurysms and dissections (TAAD) are silent but possibly lethal condition with up to 40 % of cases being hereditary. Genetic background is heterogeneous. Recently next-generation sequencing enabled efficient and cost-effective examination of gene panels. Aim of the study was to define the diagnostic yield of NGS in the 51 TAAD patients and to look for genotype-phenotype correlations within families of the patients with TAAD.

methods51 unrelated TAAD patients were examined by either whole exome sequencing or TruSight One sequencing panel. We analyzed rare variants in 10 established thoracic aortic aneurysms-associated genes. Whenever possible, we looked for co-segregation in the families. Kaplan-Meier survival curve was constructed to compare the event-free survival depending on genotype. Aortic events were defined as acute aortic dissection or first planned aortic surgery. RESULTS AND DISCUSSION: In 21 TAAD patients we found 22 rare variants, 6 (27.3 %) of these were previously reported, and 16 (73.7 %) were novel. Based on segregation data, functional analysis and software estimations we assumed that three of novel variants were causative, nine likely causative. Remaining four were classified as of unknown significance (2) and likely benign (2). In all, 9 (17.6 %) of 51 probands had a positive result when considering variants classified as causative only and 18 (35.3 %) if likely causative were also included. Genotype-positive probands (n = 18) showed shorter mean event free survival (41 years, CI 35-46) than reference group, i.e. those (n = 29) without any plausible variant identified (51 years, CI 45-57, p = 0.0083). This effect was also found when the 'genotype-positive' group was restricted to probands with 'likely causative' variants (p = 0.0092) which further supports pathogenicity of these variants. The mean event free survival was particularly low (37 years, CI 27-47) among the probands with defects in the TGF beta signaling (p = 0.0033 vs. the reference group).

conclusionsThis study broadens the spectrum of genetic background of thoracic aneurysms and dissections and supports its potential role as a prognostic factor in the patients with the disease.

Indexed as

Genetic Association StudiesAdultAortic Aneurysm, ThoracicAortic DissectionDiagnostic ImagingDNA Mutational AnalysisFemaleHeterozygoteHigh-Throughput Nucleotide SequencingHumansKaplan-Meier EstimateMaleMutationPedigreeDiagnosisLoeys–Dietz syndromeMarfan syndromeNext-generation sequencingShprintzen–Goldberg syndromeThoracic aortic aneurysm and dissections

Identifiers

PMID27146836
PMCPMC4855821
OpenAlexW2346211860

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.