Evidence map›Paper›PMID 27145994›Full record

ArticleNature communications2016

Common genetic variation in ETV6 is associated with colorectal cancer susceptibility.

Meilin Wang, Dongying Gu, Mulong Du, Zhi Xu, Suzhan Zhang, Lingjun Zhu, Jiachun Lu, Rui Zhang, Jinliang Xing, Xiaoping Miao and 14 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed, 3 pooled it
9.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 3 syntheses or guidelines pooled it, 87 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Trial
  5. Article
  6. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors at 8 institutions in 2 countries.

Meilin WangDepartment of Oncology, Nanjing First Hospital, Nanjing Medical University, Nanjing 210006, China.
Dongying GuDepartment of Oncology, Nanjing First Hospital, Nanjing Medical University, Nanjing 210006, China.
Mulong DuDepartment of Genetic Toxicology, Key Laboratory of Modern Toxicology of Ministry of Education, School of Public Health, Nanjing Medical University, Nanjing 211166, China.
Zhi XuDepartment of Oncology, Nanjing First Hospital, Nanjing Medical University, Nanjing 210006, China.
Suzhan ZhangDepartment of Surgical Oncology, Second Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou 310009, China.
Lingjun ZhuDepartment of Oncology, First Affiliated Hospital of Nanjing Medical University, Nanjing 210029, China.
Jiachun LuInstitute for Chemical Carcinogenesis, State Key Lab of Respiratory Disease, Guangzhou Medical University, Guangzhou 510182, China.
Rui ZhangDepartment of Colorectal Surgery, Liaoning Cancer Hospital and Institute, Shenyang 110042, China.
Jinliang XingDepartment of Cell Biology and Cell Engineering Research Center, State Key Laboratory of Cancer Biology, Xijing Hospital, Fourth Military Medical University, Xi'an 710032, China.
Xiaoping MiaoDepartment of Epidemiology and Biostatistics, School of Public Health, Tongji Medical College, Huazhong University of Science and Technology, Wuhan 430030, China.
Haiyan ChuDepartment of Genetic Toxicology, Key Laboratory of Modern Toxicology of Ministry of Education, School of Public Health, Nanjing Medical University, Nanjing 211166, China.
Zhibin HuJiangsu Key Laboratory of Cancer Biomarkers, Prevention and Treatment, Collaborative Innovation Center for Cancer Personalized Medicine, Nanjing Medical University, Nanjing 211166, China.
Lei YangInstitute for Chemical Carcinogenesis, State Key Lab of Respiratory Disease, Guangzhou Medical University, Guangzhou 510182, China.
Cuiju TangDepartment of Oncology, Nanjing First Hospital, Nanjing Medical University, Nanjing 210006, China.
Lei PanDepartment of Surgical Oncology, Second Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou 310009, China.
Haina DuDepartment of Oncology, First Affiliated Hospital of Nanjing Medical University, Nanjing 210029, China.
Jian ZhaoDepartment of Colorectal Surgery, Liaoning Cancer Hospital and Institute, Shenyang 110042, China.
Jiangbo DuDepartment of Epidemiology and Biostatistics, School of Public Health, Nanjing Medical University, Nanjing 211166, China.
Na TongDepartment of Genetic Toxicology, Key Laboratory of Modern Toxicology of Ministry of Education, School of Public Health, Nanjing Medical University, Nanjing 211166, China.
Jielin SunProgram for Personalized Cancer Care, NorthShore University Health System, Evanston, Illinois 60201, USA.
Hongbing ShenJiangsu Key Laboratory of Cancer Biomarkers, Prevention and Treatment, Collaborative Innovation Center for Cancer Personalized Medicine, Nanjing Medical University, Nanjing 211166, China.
Jianfeng XuProgram for Personalized Cancer Care, NorthShore University Health System, Evanston, Illinois 60201, USA.
Zhengdong ZhangJiangsu Key Laboratory of Cancer Biomarkers, Prevention and Treatment, Collaborative Innovation Center for Cancer Personalized Medicine, Nanjing Medical University, Nanjing 211166, China.
Jinfei ChenDepartment of Oncology, Nanjing First Hospital, Nanjing Medical University, Nanjing 210006, China.
Nanjing Medical University · CNGuangzhou Medical University · CNLiaoning Cancer Hospital & Institute · CNNorthShore University HealthSystem · USSecond Affiliated Hospital of Zhejiang University · CNAir Force Medical University · CNHuazhong University of Science and Technology · CNJiangsu Province Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genome-wide association studies (GWASs) have identified multiple susceptibility loci for colorectal cancer, but much of heritability remains unexplained. To identify additional susceptibility loci for colorectal cancer, here we perform a GWAS in 1,023 cases and 1,306 controls and replicate the findings in seven independent samples from China, comprising 5,317 cases and 6,887 controls. We find a variant at 12p13.2 associated with colorectal cancer risk (rs2238126 in ETV6, P=2.67 × 10(-10)). We replicate this association in an additional 1,046 cases and 1,076 controls of European ancestry (P=0.034). The G allele of rs2238126 confers earlier age at onset of colorectal cancer (P=1.98 × 10(-6)) and reduces the binding affinity of transcriptional enhancer MAX. The mRNA level of ETV6 is significantly lower in colorectal tumours than in paired normal tissues. Our findings highlight the potential importance of genetic variation in ETV6 conferring susceptibility to colorectal cancer.

Indexed as

Polymorphism, Single NucleotideAllelesAsian PeopleCell Line, TumorColorectal NeoplasmsETS Translocation Variant 6 ProteinFemaleGene FrequencyGenetic Predisposition to DiseaseGenome-Wide Association StudyGenotypeHCT116 CellsHumansMaleMiddle AgedProto-Oncogene Proteins c-etsETS Translocation Variant 6 ProteinProto-Oncogene Proteins c-etsRepressor Proteins

Identifiers

PMID27145994
PMCPMC4858728
OpenAlexW2345489110

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.