Evidence map›Paper›PMID 27145901›Full record

ArticleNature communications2016

The extracellular interactome of the human adenovirus family reveals diverse strategies for immunomodulation.

Nadia Martinez-Martin, Sree R Ramani, Jason A Hackney, Irene Tom, Bernd J Wranik, Michelle Chan, Johnny Wu, Maciej T Paluch, Kentaro Takeda, Philip E Hass and 2 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Nature communications, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
5.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 45 citations in OpenAlex.

  1. Adenoviral E3/49K: CD45-targeted immune evasion and therapeutic potential.Frontiers in cellular and infection microbiology · 2026
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  16. Non-Human Primate-Derived Adenoviruses for Future Use as Oncolytic Agents?International journal of molecular sciences · 2020
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 2 countries.

Nadia Martinez-MartinDepartment of Protein Chemistry, Genentech, 470 East Grand Avenue, South San Francisco, California 94080, USA.
Sree R RamaniDepartment of Protein Chemistry, Genentech, 470 East Grand Avenue, South San Francisco, California 94080, USA.
Jason A HackneyDepartment of Bioinformatics and Computational Biology, Genentech, 455 East Grand Avenue, South San Francisco, California 94080, USA.ORCID http://orcid.org/0000-0002-5922-563X
Irene TomDepartment of Protein Chemistry, Genentech, 470 East Grand Avenue, South San Francisco, California 94080, USA.
Bernd J WranikDepartment of Protein Chemistry, Genentech, 470 East Grand Avenue, South San Francisco, California 94080, USA.
Michelle ChanDepartment of Protein Chemistry, Genentech, 470 East Grand Avenue, South San Francisco, California 94080, USA.
Johnny WuDepartment of Bioinformatics and Computational Biology, Genentech, 455 East Grand Avenue, South San Francisco, California 94080, USA.
Maciej T PaluchDepartment of Protein Chemistry, Genentech, 470 East Grand Avenue, South San Francisco, California 94080, USA.
Kentaro TakedaDepartment of Protein Chemistry, Genentech, 470 East Grand Avenue, South San Francisco, California 94080, USA.
Philip E HassDepartment of Protein Chemistry, Genentech, 470 East Grand Avenue, South San Francisco, California 94080, USA.
Hilary ClarkDepartment of Bioinformatics and Computational Biology, Genentech, 455 East Grand Avenue, South San Francisco, California 94080, USA.
Lino C GonzalezDepartment of Protein Chemistry, Genentech, 470 East Grand Avenue, South San Francisco, California 94080, USA.
PDL BioPharma (United States) · USInstitute of Bioinformatics · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Viruses encode secreted and cell-surface expressed proteins essential to modulate host immune defenses and establish productive infections. However, to date there has been no systematic study of the extracellular interactome of any human virus. Here we utilize the E3 proteins, diverse and rapidly evolving transmembrane-containing proteins encoded by human adenoviruses, as a model system to survey the extracellular immunomodulatory landscape. From a large-scale protein interaction screen against a microarray of more than 1,500 human proteins, we find and validate 51 previously unidentified virus-host interactions. Our results uncover conserved strategies as well as substantial diversity and multifunctionality in host targeting within and between viral species. Prominent modulation of the leukocyte immunoglobulin-like and signalling lymphocyte activation molecule families and a number of inhibitory receptors were identified as hubs for viral perturbation, suggesting unrecognized immunoregulatory strategies. We describe a virus-host extracellular interaction map of unprecedented scale that provides new insights into viral immunomodulation.

Indexed as

A549 CellsAdenoviruses, HumanAnimalsCell Line, TumorCells, CulturedCHO CellsCricetulusExtracellular SpaceHEK293 CellsHeLa CellsHost-Pathogen InteractionsHumansImmunomodulationJurkat CellsK562 CellsProtein BindingProteomeViral Proteins

Identifiers

PMID27145901
PMCPMC4858740
OpenAlexW2346194751

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.