ArticleMolecular plant pathology2016
Comparative genomics reveals genes significantly associated with woody hosts in the plant pathogen Pseudomonas syringae.
Article in Molecular plant pathology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.
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Who cites it
28 citing papers in PubMed, 66 citations in OpenAlex.
- Beneath the Bark: Molecular Determinants of Adaptation and Infection in Bacterial Pathogens of Woody Hosts.Molecular plant pathology · 2026Review
- AraC-Family Transcriptional Regulator WhpR Controls Virulence in Pseudomonas savastanoi pv. savastanoi Through Regulation of Indole Metabolism.Microbial biotechnology · 2025Article
- Woody Host-Specific Type III Effector HopBL2 Is Essential for Pseudomonas savastanoi Virulence and Associates With Plasmodesmata.Molecular plant pathology · 2025Article
- A Sucrose-Utilisation Gene Cluster Contributes to Colonisation of Horse Chestnut by Pseudomonas syringae pv. aesculi.Molecular plant pathology · 2025Article
- Comparative genomic analyses provide insight into the pathogenicity of three Pseudomonas syringae pv. actinidiae strains from Anhui Province, China.BMC genomics · 2024Article
- Genomic characterization ofMicrobiology spectrum · 2024Article
- Impacts of UV radiation on Bacillus biocontrol agents and their resistance mechanisms.World journal of microbiology & biotechnology · 2024Review
- Allelic variation in the indoleacetic acid-lysine synthase gene of the bacterial pathogenFrontiers in plant science · 2023Article
- Reference-based read clustering improves theComputational and structural biotechnology journal · 2023Article
- Comparative Genomics ofFrontiers in microbiology · 2022Article
- Significance of the Diversification of Wheat Species for the Assembly and Functioning of the Root-Associated Microbiome.Frontiers in microbiology · 2021Review
- Transcriptomic and Proteomic Profiling Reveal the Key Role ofFrontiers in plant science · 2021Article
- Cherry picking by pseudomonads: After a century of research on canker, genomics provides insights into the evolution of pathogenicity towards stone fruits.Plant pathology · 2020Review
- Isolation, Characterization, and Pathogenicity of TwoMicroorganisms · 2020Article
- Genotypic and phenotypic analyses reveal distinct population structures and ecotypes for sugar beet-associatedEcology and evolution · 2020Article
- Host Range Determinants ofFrontiers in plant science · 2020Article
- Comparative genomics reveal pathogenicity-related loci in Pseudomonas syringae pv. actinidiae biovar 3.Molecular plant pathology · 2019Article
- Genome sequence analysis of the fairy ring-forming fungus Lepista sordida and gene candidates for interaction with plants.Scientific reports · 2019Article
- Inference of Convergent Gene Acquisition AmongFrontiers in microbiology · 2019Article
- Comparative genomics of 151 plant-associated bacteria reveal putative mechanisms underlying specific interactions between bacteria and plant hosts.Genes & genomics · 2018Article
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Authors and funding
4 authors at 3 institutions in 2 countries.
Funding
Abstract
The diversification of lineages within Pseudomonas syringae has involved a number of adaptive shifts from herbaceous hosts onto various species of tree, resulting in the emergence of highly destructive diseases such as bacterial canker of kiwi and bleeding canker of horse chestnut. This diversification has involved a high level of gene gain and loss, and these processes are likely to play major roles in the adaptation of individual lineages onto their host plants. In order to better understand the evolution of P. syringae onto woody plants, we have generated de novo genome sequences for 26 strains from the P. syringae species complex that are pathogenic on a range of woody species, and have looked for statistically significant associations between gene presence and host type (i.e. woody or herbaceous) across a phylogeny of 64 strains. We have found evidence for a common set of genes associated with strains that are able to colonize woody plants, suggesting that divergent lineages have acquired similarities in genome composition that may form the genetic basis of their adaptation to woody hosts. We also describe in detail the gain, loss and rearrangement of specific loci that may be functionally important in facilitating this adaptive shift. Overall, our analyses allow for a greater understanding of how gene gain and loss may contribute to adaptation in P. syringae.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.