Evidence map›Paper›PMID 27144561›Full record

ArticleInternational journal of molecular sciences2016

Ewing's Sarcoma: An Analysis of miRNA Expression Profiles and Target Genes in Paraffin-Embedded Primary Tumor Tissue.

Antonina Parafioriti, Caterina Bason, Elisabetta Armiraglio, Lucia Calciano, Primo Andrea Daolio, Martina Berardocco, Andrea Di Bernardo, Alessia Colosimo, Roberto Luksch, Anna C Berardi

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 25 citations in OpenAlex.

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  13. miRNA signatures in childhood sarcomas and their clinical implications.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2019
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  18. Bioscience reports · 2018
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 1 country.

Antonina ParafioritiUnità Operativa Complessa (U.O.C.) Azienda Socio Sanitaria Territoriale Centro Specialistico Ortopedico Traumatologico Gaetano Pini-CTO, Milano 20122, Italy. antonina.parafioriti@gpini.it.
Caterina BasonDipartimento di Medicina, Sezione di Medicina Interna B, Università di Verona, Verona 37134, Italy. caterina.bason@univr.it.
Elisabetta ArmiraglioUnità Operativa Complessa (U.O.C.) Azienda Socio Sanitaria Territoriale Centro Specialistico Ortopedico Traumatologico Gaetano Pini-CTO, Milano 20122, Italy. elisabetta.armiraglio@asst-pini-cto.it.
Lucia CalcianoDipartimento di Sanità Pubblica e Medicina di Comunità, Sezione di Epidemiologia e Statistica Medica, Università di Verona, Verona 37134, Italy. lucia.calciano@univr.it.
Primo Andrea DaolioUnità Operativa Complessa (U.O.C.) Chirurgia Ortopedica Oncologica, Azienda Socio Sanitaria Territoriale Centro Specialistico Ortopedico Traumatologico Gaetano Pini-CTO, Milano 20122, Italy. PrimoAndrea.Daolio@asst-pini-cto.it.
Martina BerardoccoUnità Operativa Complessa (U.O.C.) Immunoematologia-Medicina Trasfusionale e Laboratorio di Ematologia, Laboratorio di Ricerca "Cellule Staminali" Azienda Unità Sanitaria Locale (AUSL)-Ospedale Santo Spirito, Pescara 65125, Italy. martina.berardocco@gmail.com.
Andrea Di BernardoUnità Operativa Complessa (U.O.C.) Azienda Socio Sanitaria Territoriale Centro Specialistico Ortopedico Traumatologico Gaetano Pini-CTO, Milano 20122, Italy. andrea.dibernardo@asst-pini-cto.it.
Alessia ColosimoFacoltà di Medicina Veterinaria, Università di Teramo, Teramo 64100, Italy. acolosimo@unite.it.
Roberto LukschDipartimento di Oncologia Pediatrica, Fondazione-Istituto di Ricovero e Cura a Carattere Scientifico-(IRCCS) Istituto Nazionale dei Tumori, Milano 20133, Italy. Roberto.Luksch@istitutotumori.mi.it.
Anna C BerardiUnità Operativa Complessa (U.O.C.) Azienda Socio Sanitaria Territoriale Centro Specialistico Ortopedico Traumatologico Gaetano Pini-CTO, Milano 20122, Italy. annacberardi@yahoo.it.
Istituto Ortopedico Gaetano Pini · ITOspedale di Santo Spirito · ITUniversity of Verona · ITFondazione IRCCS Istituto Nazionale dei Tumori · ITUniversity of Teramo · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The molecular mechanism responsible for Ewing's Sarcoma (ES) remains largely unknown. MicroRNAs (miRNAs), a class of small non-coding RNAs able to regulate gene expression, are deregulated in tumors and may serve as a tool for diagnosis and prediction. However, the status of miRNAs in ES has not yet been thoroughly investigated. This study compared global miRNAs expression in paraffin-embedded tumor tissue samples from 20 ES patients, affected by primary untreated tumors, with miRNAs expressed in normal human mesenchymal stromal cells (MSCs) by microarray analysis. A miRTarBase database was used to identify the predicted target genes for differentially expressed miRNAs. The miRNAs microarray analysis revealed distinct patterns of miRNAs expression between ES samples and normal MSCs. 58 of the 954 analyzed miRNAs were significantly differentially expressed in ES samples compared to MSCs. Moreover, the qRT-PCR analysis carried out on three selected miRNAs showed that miR-181b, miR-1915 and miR-1275 were significantly aberrantly regulated, confirming the microarray results. Bio-database analysis identified BCL-2 as a bona fide target gene of the miR-21, miR-181a, miR-181b, miR-29a, miR-29b, miR-497, miR-195, miR-let-7a, miR-34a and miR-1915. Using paraffin-embedded tissues from ES patients, this study has identified several potential target miRNAs and one gene that might be considered a novel critical biomarker for ES pathogenesis.

Indexed as

AdolescentAdultBone NeoplasmsChildChild, PreschoolCluster AnalysisFemaleHumansMaleMesenchymal Stem CellsMicroRNAsOligonucleotide Array Sequence AnalysisParaffin EmbeddingSarcoma, EwingTranscriptomeYoung AdultMicroRNAsEwing’s Sarcomahuman mesenchymal stem cellsmicroRNAsmiRTarBase database

Identifiers

PMID27144561
PMCPMC4881482
OpenAlexW2343449467

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.