Evidence map›Paper›PMID 27144410›Full record

ArticleAmerican journal of respiratory cell and molecular biology2016

Airway Progenitor Clone Formation Is Enhanced by Y-27632-Dependent Changes in the Transcriptome.

Susan D Reynolds, Cydney Rios, Agata Wesolowska-Andersen, Yongbin Zhuang, Mary Pinter, Carrie Happoldt, Cynthia L Hill, Scott W Lallier, Gregory P Cosgrove, George M Solomon and 2 more

Open access · greenAbstract read
In one paragraph

Article in American journal of respiratory cell and molecular biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 77 papers.

0numbers the graph read from it
0cells of the map it votes in
77citing papers in PubMed
11.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

77 citing papers in PubMed, 113 citations in OpenAlex.

  1. Trial
  2. Trial
  3. Preclinical human models of primary ciliary dyskinesia.European respiratory review : an official journal of the European Respiratory Society · 2026
    Review
  4. Article
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  7. Article
  8. Article
  9. Secondhand vape exposure regulation of CFTR and immune function in cystic fibrosis.American journal of physiology. Lung cellular and molecular physiology · 2025
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Stem cells, cell therapies, and bioengineering in lung biology and diseases 2023.American journal of physiology. Lung cellular and molecular physiology · 2024
    Review
  15. Cell Culture Differentiation and Proliferation Conditions Influence theAmerican journal of respiratory cell and molecular biology · 2024
    Article
  16. Article
  17. Article
  18. Article
  19. Viral airway injury promotes cell engraftment in an in vitro model of cystic fibrosis cell therapy.American journal of physiology. Lung cellular and molecular physiology · 2024
    Article
  20. Article

17 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Susan D Reynolds1 Center for Perinatal Research; Nationwide Children's Hospital, Columbus, Ohio.
Cydney Rios2 Center for Genes, Environment, and Health, and.
Agata Wesolowska-Andersen2 Center for Genes, Environment, and Health, and.
Yongbin Zhuang2 Center for Genes, Environment, and Health, and.
Mary PinterDepartments of 3 Pediatrics and.
Carrie HappoldtDepartments of 3 Pediatrics and.
Cynthia L Hill1 Center for Perinatal Research; Nationwide Children's Hospital, Columbus, Ohio.
Scott W Lallier1 Center for Perinatal Research; Nationwide Children's Hospital, Columbus, Ohio.
Gregory P Cosgrove4 Medicine, National Jewish Health, Denver, Colorado.
George M Solomon6 Department of Medicine, University of Alabama-Birmingham, Birmingham, Alabama; and.
David P NicholsDepartments of 3 Pediatrics and.
Max A Seibold2 Center for Genes, Environment, and Health, and.
National Jewish Health · USNationwide Children's Hospital · USUniversity of Alabama at Birmingham · USUniversity of Colorado Denver · US

Funding

University of Colorado Cancer Center Support Grant - Lung Cancer Patient-Derived Xenografts with Autologous Human Immune SystemsP30CA046934 · NCI · UNIVERSITY OF COLORADO DENVER · PI James V Degregori · 1988 to 2026
$117.0M
Transgenic and Gene Targeting CoreP30AR057212 · NIAMS · UNIVERSITY OF COLORADO DENVER · PI NORRIS, DAVID A. · 2009 to 2018
$6.2M
Genetic Control of Airway Epithelium Gene Expression in Childhood AsthmaticsR01HL128439 · NHLBI · NATIONAL JEWISH HEALTH · PI SEIBOLD, MAX A · 2015 to 2019
$3.1M
Identification of Tracheobronchial Basal Cell-Specific GenesR21HL113961 · NHLBI · NATIONAL JEWISH HEALTH · PI REYNOLDS, SUSAN D · 2013 to 2014
$443k
NCI NIH HHS P30 CA046934NHLBI NIH HHS R01 HL128439NHLBI NIH HHS R21 HL113961NIAMS NIH HHS P30 AR057212
6 · The paper itself

Abstract

The application of conditional reprogramming culture (CRC) methods to nasal airway epithelial cells would allow more wide-spread incorporation of primary airway epithelial culture models into complex lung disease research. In this study, we adapted the CRC method to nasal airway epithelial cells, investigated the growth advantages afforded by this technique over standard culture methods, and determined the cellular and molecular basis of CRC cell culture effects. We found that the CRC method allowed the production of 7.1 × 10(10) cells after 4 passages, approximately 379 times more cells than were generated by the standard bronchial epithelial growth media (BEGM) method. These nasal airway epithelial cells expressed normal basal cell markers and could be induced to form a mucociliary epithelium. Progenitor cell frequency was significantly higher using the CRC method in comparison to the standard culture method, and progenitor cell maintenance was dependent on addition of the Rho-kinase inhibitor Y-27632. Whole-transcriptome sequencing analysis demonstrated widespread gene expression changes in Y-27632-treated basal cells. We found that Y-27632 treatment altered expression of genes fundamental to the formation of the basal cell cytoskeleton, cell-cell junctions, and cell-extracellular matrix (ECM) interactions. Importantly, we found that Y-27632 treatment up-regulated expression of unique basal cell intermediate filament and desmosomal genes. Conversely, Y-27632 down-regulated multiple families of protease/antiprotease genes involved in ECM remodeling. We conclude that Y-27632 fundamentally alters cell-cell and cell-ECM interactions, which preserves basal progenitor cells and allows greater cell amplification.

Indexed as

AmidesAnimalsBronchiCell CommunicationCell Culture TechniquesCell DifferentiationCell-Matrix JunctionsCellular ReprogrammingClone CellsCulture MediaEpithelial CellsExtracellular MatrixFibroblastsGene Expression RegulationHumansLungAmidesCulture MediaPyridinesY 27632airway stem progenitorclone-forming cell frequencyconditionally reprogrammed cellsY-27632

Identifiers

PMID27144410
PMCPMC5023026
OpenAlexW2347182889

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.