Evidence map›Paper›PMID 27144089›Full record

ArticleBacteriophage

Bacteriophage MS2 genomic RNA encodes an assembly instruction manual for its capsid.

Peter G Stockley, Simon J White, Eric Dykeman, Iain Manfield, Ottar Rolfsson, Nikesh Patel, Richard Bingham, Amy Barker, Emma Wroblewski, Rebecca Chandler-Bostock and 4 more

Open access · hybridAbstract read
In one paragraph

Article in Bacteriophage. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
6.5field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 45 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Chemical reviews · 2026
    Review
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  11. Advancements in protein nanoparticle vaccine platforms to combat infectious disease.Wiley interdisciplinary reviews. Nanomedicine and nanobiotechnology · 2021
    Review
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Targeting mechanisms of tailed bacteriophages.Nature reviews. Microbiology · 2018
    Review
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 2 countries.

Peter G StockleyAstbury Center for Structural Molecular Biology, University of Leeds , Leeds, UK.
Simon J WhiteAstbury Center for Structural Molecular Biology, University of Leeds , Leeds, UK.
Eric DykemanDepartment of Biology and Mathematics & York Center for Complex Systems Analysis, University of York , York, UK.
Iain ManfieldAstbury Center for Structural Molecular Biology, University of Leeds , Leeds, UK.
Ottar RolfssonCenter for Systems Biology, University of Iceland, University of Iceland Biomedical Center , Reykjavik, Iceland.
Nikesh PatelAstbury Center for Structural Molecular Biology, University of Leeds , Leeds, UK.
Richard BinghamDepartment of Biology and Mathematics & York Center for Complex Systems Analysis, University of York , York, UK.
Amy BarkerAstbury Center for Structural Molecular Biology, University of Leeds , Leeds, UK.
Emma WroblewskiAstbury Center for Structural Molecular Biology, University of Leeds , Leeds, UK.
Rebecca Chandler-BostockAstbury Center for Structural Molecular Biology, University of Leeds , Leeds, UK.
Eva U WeißDepartment of Biology and Mathematics & York Center for Complex Systems Analysis, University of York , York, UK.
Neil A RansonAstbury Center for Structural Molecular Biology, University of Leeds , Leeds, UK.
Roman TumaAstbury Center for Structural Molecular Biology, University of Leeds , Leeds, UK.
Reidun TwarockDepartment of Biology and Mathematics & York Center for Complex Systems Analysis, University of York , York, UK.
University of Leeds · GBUniversity of York · GBUniversity of Iceland · IS

Funding

Wellcome Trust 090932Wellcome Trust 110145/Z/15/Z
6 · The paper itself

Abstract

Using RNA-coat protein crosslinking we have shown that the principal RNA recognition surface on the interior of infectious MS2 virions overlaps with the known peptides that bind the high affinity translational operator, TR, within the phage genome. The data also reveal the sequences of genomic fragments in contact with the coat protein shell. These show remarkable overlap with previous predictions based on the hypothesis that virion assembly is mediated by multiple sequences-specific contacts at RNA sites termed Packaging Signals (PSs). These PSs are variations on the TR stem-loop sequence and secondary structure. They act co-operatively to regulate the dominant assembly pathway and ensure cognate RNA encapsidation. In MS2, they also trigger conformational change in the dimeric capsomere creating the A/B quasi-conformer, 60 of which are needed to complete the

Indexed as

RNA bacteriophageRNA packaging signalsvirion assembly

Identifiers

PMID27144089
PMCPMC4836477
OpenAlexW2297554206

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.