Evidence map›Paper›PMID 27142713›Full record

ArticleJournal of neurology2016

Validation of a clinical practice-based algorithm for the diagnosis of autosomal recessive cerebellar ataxias based on NGS identified cases.

Martial Mallaret, Mathilde Renaud, Claire Redin, Nathalie Drouot, Jean Muller, Francois Severac, Jean Louis Mandel, Wahiba Hamza, Traki Benhassine, Lamia Ali-Pacha and 15 more

Abstract read
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In one paragraph

Article in Journal of neurology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Article
  3. Primary Coenzyme Q10 Deficiency: An Update.Antioxidants (Basel, Switzerland) · 2023
    Review
  4. Article
  5. NGS in Hereditary Ataxia: When Rare Becomes Frequent.International journal of molecular sciences · 2021
    Article
  6. Article
  7. Observational
  8. Article
  9. Article
  10. A Novel Pathogenic Variant inJournal of clinical medicine · 2019
    Article
  11. Review
  12. Article
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors.

Martial MallaretService de Neurologie, Centre Hospitalier de Haguenau, 67500, Haguenau, France.
Mathilde RenaudInstitut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC), INSERM-U964/CNRS-UMR7104/Université de Strasbourg, 67404, Illkirch, France.
Claire RedinInstitut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC), INSERM-U964/CNRS-UMR7104/Université de Strasbourg, 67404, Illkirch, France.
Nathalie DrouotInstitut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC), INSERM-U964/CNRS-UMR7104/Université de Strasbourg, 67404, Illkirch, France.
Jean MullerInstitut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC), INSERM-U964/CNRS-UMR7104/Université de Strasbourg, 67404, Illkirch, France.
Francois SeveracLaboratoire de Biostatistique et d'Informatique Médicale, Faculté de Médecine, Hôpitaux Universitaires de Strasbourg, Strasbourg, France.
Jean Louis MandelInstitut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC), INSERM-U964/CNRS-UMR7104/Université de Strasbourg, 67404, Illkirch, France.
Wahiba HamzaLaboratoire de Biologie Cellulaire et Moléculaire, Faculté des Sciences Biologiques, USTHB, Algiers, Algeria.
Traki BenhassineLaboratoire de Biologie Cellulaire et Moléculaire, Faculté des Sciences Biologiques, USTHB, Algiers, Algeria.
Lamia Ali-PachaDépartement de Neurologie, Centre hospitalier universitaire Mustapha Pacha, Algiers, Algeria.
Meriem TazirDépartement de Neurologie, Centre hospitalier universitaire Mustapha Pacha, Algiers, Algeria.
Alexandra DurrFédération de Génétique, Hôpital de la Pitié-Salpêtrière, Assistance Publique-Hôpitaux de Paris, 75013, Paris, France.
Marie-Lorraine MoninDépartement de Génétique et de Cytogénétique, Hôpital de la Pitié-Salpêtrière, Assistance Publique-Hôpitaux de Paris, 75013, Paris, France.
Cyril MignotDépartement de Génétique et de Cytogénétique, Hôpital de la Pitié-Salpêtrière, Assistance Publique-Hôpitaux de Paris, 75013, Paris, France.
Perrine CharlesDépartement de Neurologie, Hôpital de la Pitié-Salpêtrière, Assistance Publique-Hôpitaux de Paris, 75651, Paris, France.
Lionel Van MaldergemCentre de Génétique Humaine, Université de Franche-Comté, Besançon, France.
Ludivine ChamardResearch Memory Center (CMRR), CHU Besançon, Besançon, France.
Christel Thauvin-RobinetCentre de Génétique, Hôpital d'Enfants, CHU Dijon and EA4271, Université de Bourgogne, Dijon, France.
Vincent LaugelHôpital de Hautepierre, Neuropédiatrie, Hôpitaux Universitaires de Strasbourg, 67098, Strasbourg cedex, France.
Lydie BurglenCentre de Référence Malformations et Maladies congénitales du Cervelet, INSERM U1141, Assistance Publique-Hôpitaux de Paris, Paris, France.
Patrick CalvasService de Génétique Médicale, Pavillon Ch Lefebvre, Hôpital Purpan-CHU de Toulouse, TSA 40031, 31059, Toulouse Cedex, France.
Marie-Céline FleuryDepartment of Neurology, Movement Disorders Unit, Hôpital de Hautepierre, 67098, Strasbourg cedex, France.
Christine TranchantInstitut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC), INSERM-U964/CNRS-UMR7104/Université de Strasbourg, 67404, Illkirch, France.
Mathieu AnheimInstitut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC), INSERM-U964/CNRS-UMR7104/Université de Strasbourg, 67404, Illkirch, France. mathieu.anheim@chru-strasbourg.fr.
Michel KoenigLaboratoire de Génétique de Maladies Rares, Institut Universitaire de Recherche Clinique, Université de Montpellier, EA 7402, CHU Montpellier, 34093, Montpellier, France.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Establishing a molecular diagnosis of autosomal recessive cerebellar ataxias (ARCA) is challenging due to phenotype and genotype heterogeneity. We report the validation of a previously published clinical practice-based algorithm to diagnose ARCA. Two assessors performed a blind analysis to determine the most probable mutated gene based on comprehensive clinical and paraclinical data, without knowing the molecular diagnosis of 23 patients diagnosed by targeted capture of 57 ataxia genes and high-throughput sequencing coming from a 145 patients series. The correct gene was predicted in 61 and 78 % of the cases by the two assessors, respectively. There was a high inter-rater agreement [K = 0.85 (0.55-0.98) p < 0.001] confirming the algorithm's reproducibility. Phenotyping patients with proper clinical examination, imaging, biochemical investigations and nerve conduction studies remain crucial for the guidance of molecular analysis and to interpret next generation sequencing results. The proposed algorithm should be helpful for diagnosing ARCA in clinical practice.

Indexed as

AlgorithmsHigh-Throughput Nucleotide SequencingAdolescentAdultAgedAge of OnsetCerebellar AtaxiaDatabases, GeneticFemaleGenes, RecessiveHumansMaleMiddle AgedReproducibility of ResultsRetrospective StudiesYoung AdultElectromyographyNeurogeneticsNext generation sequencingRecessive ataxia

Identifiers

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.