Evidence map›Paper›PMID 27142519›Full record

ArticleBMC genomics2016

Thermal manipulation of the chicken embryo triggers differential gene expression in response to a later heat challenge.

Thomas Loyau, Christelle Hennequet-Antier, Vincent Coustham, Cécile Berri, Marie Leduc, Sabine Crochet, Mélanie Sannier, Michel Jacques Duclos, Sandrine Mignon-Grasteau, Sophie Tesseraud and 8 more

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
11.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 96 citations in OpenAlex.

  1. Review
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  9. The avian embryo as a time-honoured animal model in developmental, biomedical and agricultural research.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 3 institutions in 2 countries.

Thomas LoyauURA, INRA, 37380, Nouzilly, France.
Christelle Hennequet-AntierURA, INRA, 37380, Nouzilly, France.
Vincent CousthamURA, INRA, 37380, Nouzilly, France.
Cécile BerriURA, INRA, 37380, Nouzilly, France.
Marie LeducURA, INRA, 37380, Nouzilly, France.
Sabine CrochetURA, INRA, 37380, Nouzilly, France.
Mélanie SannierURA, INRA, 37380, Nouzilly, France.
Michel Jacques DuclosURA, INRA, 37380, Nouzilly, France.
Sandrine Mignon-GrasteauURA, INRA, 37380, Nouzilly, France.
Sophie TesseraudURA, INRA, 37380, Nouzilly, France.
Aurélien BrionneURA, INRA, 37380, Nouzilly, France.
Sonia Métayer-CoustardURA, INRA, 37380, Nouzilly, France.
Marco MoroldoCRB GADIE, INRA, Domaine de Vilvert, 78350, Jouy-en-Josas, France.
Jérôme LecardonnelCRB GADIE, INRA, Domaine de Vilvert, 78350, Jouy-en-Josas, France.
Patrice MartinGABI, INRA, Plateforme de Microgénomique Iso Cell Express (ICE), 78350, Jouy-en-Josas, France.
Sandrine LagarriguePEGASE, INRA, Agrocampus Rennes, 35590, Saint-Gilles, France.
Shlomo YahavInstitute of Animal Science, The Volcani Center, Bet Dagan, P.O. Box 6, 50250, Israel.
Anne CollinURA, INRA, 37380, Nouzilly, France. Anne.Collin@tours.inra.fr.
AgroParisTech · FRAgricultural Research Organization · ILPhysiologie Environnement et Génétique pour l'Animal et les Systèmes d'Elevage · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundMeat type chickens have limited capacities to cope with high environmental temperatures, this sometimes leading to mortality on farms and subsequent economic losses. A strategy to alleviate this problem is to enhance adaptive capacities to face heat exposure using thermal manipulation (TM) during embryogenesis. This strategy was shown to improve thermotolerance during their life span. The aim of this study was to determine the effects of TM (39.5 °C, 12 h/24 vs 37.8 °C from d7 to d16 of embryogenesis) and of a subsequent heat challenge (32 °C for 5 h) applied on d34 on gene expression in the Pectoralis major muscle (PM). A chicken gene expression microarray (8 × 60 K) was used to compare muscle gene expression profiles of Control (C characterized by relatively high body temperatures, Tb) and TM chickens (characterized by a relatively low Tb) reared at 21 °C and at 32 °C (CHC and TMHC, respectively) in a dye-swap design with four comparisons and 8 broilers per treatment. Real-time quantitative PCR (RT-qPCR) was subsequently performed to validate differential expression in each comparison. Gene ontology, clustering and network building strategies were then used to identify pathways affected by TM and heat challenge.

resultsAmong the genes differentially expressed (DE) in the PM (1.5 % of total probes), 28 were found to be differentially expressed between C and TM, 128 between CHC and C, and 759 between TMHC and TM. No DE gene was found between TMHC and CHC broilers. The majority of DE genes analyzed by RT-qPCR were validated. In the TM/C comparison, DE genes were involved in energy metabolism and mitochondrial function, cell proliferation, vascularization and muscle growth; when comparing heat-exposed chickens to their own controls, TM broilers developed more specific pathways than C, especially involving genes related to metabolism, stress response, vascularization, anti-apoptotic and epigenetic processes.

conclusionsThis study improved the understanding of the long-term effects of TM on PM muscle. TM broilers displaying low Tb may have lower metabolic intensity in the muscle, resulting in decreased metabolic heat production, whereas modifications in vascularization may enhance heat loss. These specific changes could in part explain the better adaptation of TM broilers to heat.

Indexed as

Gene Regulatory NetworksAnimalsChick EmbryoChickensEmbryonic DevelopmentGene Expression ProfilingGene Expression Regulation, DevelopmentalHot TemperatureMuscle DevelopmentOligonucleotide Array Sequence AnalysisPectoralis MusclesReal-Time Polymerase Chain Reaction

Identifiers

PMID27142519
PMCPMC4855354
OpenAlexW2346339331

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.