Evidence map›Paper›PMID 27142338›Full record

ArticleCancer2016

Prostate tumor DNA methylation is associated with cigarette smoking and adverse prostate cancer outcomes.

Irene M Shui, Chao-Jen Wong, Shanshan Zhao, Suzanne Kolb, Ericka M Ebot, Milan S Geybels, Rohina Rubicz, Jonathan L Wright, Daniel W Lin, Brandy Klotzle and 5 more

Abstract read
In one paragraph

Article in Cancer, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed.

  1. Article
  2. Article
  3. Aldehyde Oxidase 1 Deficiency Enhances Aerobic Exercise Performance by Promoting Skeletal Muscle Adaptation and Improving Mitochondrial Function.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2025
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  15. Article
  16. Article
  17. Article
  18. Tobacco smoking and death from prostate cancer in US veterans.Prostate cancer and prostatic diseases · 2020
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Irene M ShuiDivision of Public Health Sciences, Fred Hutchinson Cancer Research Center, Seattle, Washington.
Chao-Jen WongDivision of Public Health Sciences, Fred Hutchinson Cancer Research Center, Seattle, Washington.
Shanshan ZhaoBiostatistics and Computational Biology Branch, National Institute of Environmental Health Sciences, Research Triangle Park, North Carolina.
Suzanne KolbDivision of Public Health Sciences, Fred Hutchinson Cancer Research Center, Seattle, Washington.
Ericka M EbotDepartment of Epidemiology, Harvard T. H. Chan School of Public Health, Boston, Massachusetts.
Milan S GeybelsDivision of Public Health Sciences, Fred Hutchinson Cancer Research Center, Seattle, Washington.
Rohina RubiczDivision of Public Health Sciences, Fred Hutchinson Cancer Research Center, Seattle, Washington.
Jonathan L WrightDivision of Public Health Sciences, Fred Hutchinson Cancer Research Center, Seattle, Washington.
Daniel W LinDivision of Public Health Sciences, Fred Hutchinson Cancer Research Center, Seattle, Washington.
Brandy KlotzleIllumina, Inc, San Diego, California.
Marina BibikovaIllumina, Inc, San Diego, California.
Jian-Bing FanAnchorDx Corp, Guangzhou, Guangdong, China.
Elaine A OstranderCancer Genetics and Comparative Genomics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, Maryland.
Ziding FengDepartment of Biostatistics, The University of Texas MD Anderson Cancer Center, Houston, Texas.
Janet L StanfordDivision of Public Health Sciences, Fred Hutchinson Cancer Research Center, Seattle, Washington.

Funding

Translational Bioimaging Core Shared ResourceP30CA015704 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI Eric Collisson · 1985 to 2026
$296.4M
Tumor Evolution and Metastasis ProgramP30CA016672 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI Fabien Delerue · 1985 to 2026
$290.8M
TRANSCRIPTOME AND PROTEOME STRATIFICATION OF PROSTATE ADENOCARCINOMA PHENOTYPESP50CA097186 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI PETER S NELSON · 2002 to 2026
$58.1M
Finding Genes for Human Prostate CancerZIAHG200325 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI OSTRANDER, ELAINE · 2009 to 2021
$17.7M
NSAIDS and Other Medications in Prostate Cancer EtiologyR01CA092579 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI STANFORD, JANET L · 2001 to 2005
$3.2M
Aggressive Prostate Cancer: Linking Epigenomics and Genetics for PreventionK05CA175147 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI STANFORD, JANET L · 2014 to 2018
$445k
PROSTATE CANCER IN RELATION TO VASECTOMYR01CA056678 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI STANFORD, JANET L · 1993 to 1997
–
NCI NIH HHS K05 CA175147NCI NIH HHS P30 CA015704NCI NIH HHS P30 CA016672NCI NIH HHS P50 CA097186NCI NIH HHS R01 CA056678NCI NIH HHS R01 CA092579
6 · The paper itself

Abstract

backgroundDNA methylation has been hypothesized as a mechanism for explaining the association between smoking and adverse prostate cancer (PCa) outcomes. This study was aimed at assessing whether smoking is associated with prostate tumor DNA methylation and whether these alterations may explain in part the association of smoking with PCa recurrence and mortality.

methodsA total of 523 men had radical prostatectomy as their primary treatment, detailed smoking history data, long-term follow-up for PCa outcomes, and tumor tissue profiled for DNA methylation. Ninety percent of the men also had matched tumor gene expression data. A methylome-wide analysis was conducted to identify differentially methylated regions (DMRs) by smoking status. To select potential functionally relevant DMRs, their correlation with the messenger RNA (mRNA) expression of corresponding genes was evaluated. Finally, a smoking-related methylation score based on the top-ranked DMRs was created to assess its association with PCa outcomes.

resultsForty DMRs were associated with smoking status, and 10 of these were strongly correlated with mRNA expression (aldehyde oxidase 1 [AOX1], claudin 5 [CLDN5], early B-cell factor 1 [EBF1], homeobox A7 [HOXA7], lectin galactoside-binding soluble 3 [LGALS3], microtubule-associated protein τ [MAPT], protocadherin γ A [PCDHGA]/protocadherin γ B [PCDHGB], paraoxonase 3 [PON3], synaptonemal complex protein 2 like [SYCP2L], and zinc finger and SCAN domain containing 12 [ZSCAN12]). Men who were in the highest tertile for the smoking-methylation score derived from these DMRs had a higher risk of recurrence (odds ratio [OR], 2.29; 95% confidence interval [CI], 1.42-3.72) and lethal disease (OR, 4.21; 95% CI, 1.65-11.78) in comparison with men in the lower 2 tertiles.

conclusionsThis integrative molecular epidemiology study supports the hypothesis that smoking-associated tumor DNA methylation changes may explain at least part of the association between smoking and adverse PCa outcomes. Future studies are warranted to confirm these findings and understand the implications for improving patient outcomes. Cancer 2016;122:2168-77. © 2016 American Cancer Society.

Indexed as

DNA MethylationSmokingAdultAgedCpG IslandsEpigenesis, GeneticGene Expression ProfilingHumansMaleMiddle AgedMortalityNeoplasm GradingNeoplasm Recurrence, LocalOdds RatioPatient Outcome AssessmentPrognosisDNA methylationepigeneticsprostate cancerprostate cancer outcomessmoking

Identifiers

PMID27142338
PMCPMC4930391

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.