Evidence map›Paper›PMID 27140645›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

Hsp70 biases the folding pathways of client proteins.

Ashok Sekhar, Rina Rosenzweig, Guillaume Bouvignies, Lewis E Kay

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
7.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 107 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Probing excited stateMethods (San Diego, Calif.) · 2023
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Review
  17. Structural basis of protein substrate processing by human mitochondrial high-temperature requirement A2 protease.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 3 countries.

Ashok SekharDepartment of Molecular Genetics, The University of Toronto, Toronto, ON, Canada M5S 1A8; Department of Biochemistry, The University of Toronto, Toronto, ON, Canada M5S 1A8; Department of Chemistry, The University of Toronto, Toronto, ON, Canada M5S 1A8;
Rina RosenzweigDepartment of Molecular Genetics, The University of Toronto, Toronto, ON, Canada M5S 1A8; Department of Biochemistry, The University of Toronto, Toronto, ON, Canada M5S 1A8; Department of Chemistry, The University of Toronto, Toronto, ON, Canada M5S 1A8; Department of Structural Biology, Weizmann Institute of Science, Rehovot 76100, Israel;
Guillaume BouvigniesDépartement de Chimie, École Normale Supérieure (ENS)-Paris Sciences et Lettres (PSL) Research University, 75005 Paris, France; Laboratoire des Biomolécules (LBM), Sorbonnes Universités, Université Pierre et Marie Curie (UPMC), Université Paris 06, 75005 Paris, France; UMR 7203 LBM, CNRS, 75005 Paris, France;ORCID 0000-0003-4398-0320
Lewis E KayDepartment of Molecular Genetics, The University of Toronto, Toronto, ON, Canada M5S 1A8; Department of Biochemistry, The University of Toronto, Toronto, ON, Canada M5S 1A8; Department of Chemistry, The University of Toronto, Toronto, ON, Canada M5S 1A8; Program in Molecular Structure and Function, Hospital for Sick Children, Toronto, ON, Canada M5G 1X8 kay@pound.med.utoronto.ca.
University of Toronto · CACentre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The 70-kDa heat shock protein (Hsp70) family of chaperones bind cognate substrates to perform a variety of different processes that are integral to cellular homeostasis. Although detailed structural information is available on the chaperone, the structural features of folding competent substrates in the bound form have not been well characterized. Here we use paramagnetic relaxation enhancement (PRE) NMR spectroscopy to probe the existence of long-range interactions in one such folding competent substrate, human telomere repeat binding factor (hTRF1), which is bound to DnaK in a globally unfolded conformation. We show that DnaK binding modifies the energy landscape of the substrate by removing long-range interactions that are otherwise present in the unbound, unfolded conformation of hTRF1. Because the unfolded state of hTRF1 is only marginally populated and transiently formed, it is inaccessible to standard NMR approaches. We therefore developed a (1)H-based CEST experiment that allows measurement of PREs in sparse states, reporting on transiently sampled conformations. Our results suggest that DnaK binding can significantly bias the folding pathway of client substrates such that secondary structure forms first, followed by the development of longer-range contacts between more distal parts of the protein.

Indexed as

HSP70 Heat-Shock ProteinsHumansKineticsProtein BindingProtein FoldingTelomeric Repeat Binding Protein 1ThermodynamicsHSP70 Heat-Shock ProteinsTelomeric Repeat Binding Protein 1excited statesHsp70molecular chaperonesPREprotein folding

Identifiers

PMID27140645
PMCPMC4878499
OpenAlexW2345555701

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.