Evidence map›Paper›PMID 27140641›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

Intercellular signaling through secreted proteins induces free-energy gradient-directed cell movement.

Nataly Kravchenko-Balasha, Young Shik Shin, Alex Sutherland, R D Levine, James R Heath

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Deciphering Cell-Cell Interactions with Integrative Single-Cell Secretion Profiling.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2023
    Article
  7. Review
  8. Article
  9. The Intriguing Landscape of Single-Cell Protein Analysis.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2022
    Review
  10. Single-Cell Proteomics.Trends in biochemical sciences · 2021
    Review
  11. Review
  12. Thermodynamic energetics underlying genomic instability and whole-genome doubling in cancer.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  13. Review
  14. Article
  15. Article
  16. Single-cell analysis targeting the proteome.Nature reviews. Chemistry · 2020
    Review
  17. Article
  18. Personalized disease signatures through information-theoretic compaction of big cancer data.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Nataly Kravchenko-BalashaNanoSystems Biology Cancer Center, Division of Chemistry, California Institute of Technology, Pasadena, CA 91125;
Young Shik ShinDepartment of Molecular and Medical Pharmacology, David Geffen School of Medicine, University of California, Los Angeles, CA 90095; youngshik@gmail.com rafi@fh.huji.ac.il heath@caltech.edu.
Alex SutherlandNanoSystems Biology Cancer Center, Division of Chemistry, California Institute of Technology, Pasadena, CA 91125;
R D LevineDepartment of Molecular and Medical Pharmacology, David Geffen School of Medicine, University of California, Los Angeles, CA 90095; Department of Chemistry and Biochemistry, University of California, Los Angeles, CA 90095; The Institute of Chemistry, The Hebrew University of Jerusalem, Jerusalem 91904, Israel youngshik@gmail.com rafi@fh.huji.ac.il heath@caltech.edu.
James R HeathNanoSystems Biology Cancer Center, Division of Chemistry, California Institute of Technology, Pasadena, CA 91125; youngshik@gmail.com rafi@fh.huji.ac.il heath@caltech.edu.

Funding

QUANTITATIVE IMAGE ANALYSIS SPECIALIZED RESOURCE COREU54CA119347 · NCI · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI ROUKES, MICHAEL L · 2005 to 2009
$17.8M
Repurposing of cancer therapeutics for treatment of patients with COVID-19 diseaseU54CA199090 · NCI · INSTITUTE FOR SYSTEMS BIOLOGY · PI HEATH, JAMES R., RIBAS, ANTONI · 2015 to 2020
$11.4M
Steady states and cellular transitions associated with carcinogenesis and tumorprogressionU01CA217655 · NCI · INSTITUTE FOR SYSTEMS BIOLOGY · PI HEATH, JAMES R., WEI, WEI · 2017 to 2021
$3.9M
NCI NIH HHS U01 CA217655NCI NIH HHS U54 CA119347NCI NIH HHS U54 CA199090
6 · The paper itself

Abstract

Controlling cell migration is important in tissue engineering and medicine. Cell motility depends on factors such as nutrient concentration gradients and soluble factor signaling. In particular, cell-cell signaling can depend on cell-cell separation distance and can influence cellular arrangements in bulk cultures. Here, we seek a physical-based approach, which identifies a potential governed by cell-cell signaling that induces a directed cell-cell motion. A single-cell barcode chip (SCBC) was used to experimentally interrogate secreted proteins in hundreds of isolated glioblastoma brain cancer cell pairs and to monitor their relative motions over time. We used these trajectories to identify a range of cell-cell separation distances where the signaling was most stable. We then used a thermodynamics-motivated analysis of secreted protein levels to characterize free-energy changes for different cell-cell distances. We show that glioblastoma cell-cell movement can be described as Brownian motion biased by cell-cell potential. To demonstrate that the free-energy potential as determined by the signaling is the driver of motion, we inhibited two proteins most involved in maintaining the free-energy gradient. Following inhibition, cell pairs showed an essentially random Brownian motion, similar to the case for untreated, isolated single cells.

Indexed as

ThermodynamicsCell CommunicationCell MovementGlioblastomaHumansProteinsSignal TransductionProteinsBrownian dynamicscell–cell forcecell motilityLangevin equationsurprisal analysis

Identifiers

PMID27140641
PMCPMC4878481

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.