Evidence map›Paper›PMID 27139435›Full record

ArticleJournal of cell communication and signaling2016

An integrated signal transduction network of macrophage migration inhibitory factor.

Tejaswini Subbannayya, Prathyaksha Variar, Jayshree Advani, Bipin Nair, Subramanian Shankar, Harsha Gowda, Sven Saussez, Aditi Chatterjee, T S Keshava Prasad

Open access · hybridAbstract read
In one paragraph

Article in Journal of cell communication and signaling, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed, 1 pooled it
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 1 synthesis or guideline pooled it, 38 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Review
  5. Immune Mechanisms in Inflammatory Anemia.Annual review of immunology · 2023
    Review
  6. Article
  7. Article
  8. An assembly of galanin-galanin receptor signaling network.Journal of cell communication and signaling · 2021
    Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. IncreasedFrontiers in microbiology · 2019
    Article
  15. Article
  16. A network map of thrombopoietin signaling.Journal of cell communication and signaling · 2018
    Article
  17. Article
  18. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 7 institutions in 2 countries.

Tejaswini SubbannayyaInstitute of Bioinformatics, International Technology Park, Whitefield, Bangalore, 560066, India.
Prathyaksha VariarArmed Forces Medical College, Pune, 411040, India.
Jayshree AdvaniInstitute of Bioinformatics, International Technology Park, Whitefield, Bangalore, 560066, India.
Bipin NairAmrita School of Biotechnology, Amrita University, Kollam, 690525, India.
Subramanian ShankarCommand Hospital (Air Force), Bangalore, 560007, India.
Harsha GowdaInstitute of Bioinformatics, International Technology Park, Whitefield, Bangalore, 560066, India.
Sven SaussezLaboratory of Anatomy and Cell Biology, Faculty of Medicine and Pharmacy, University of Mons, B-7000, Mons, Belgium.
Aditi ChatterjeeInstitute of Bioinformatics, International Technology Park, Whitefield, Bangalore, 560066, India. aditi@ibioinformatics.org.
T S Keshava PrasadInstitute of Bioinformatics, International Technology Park, Whitefield, Bangalore, 560066, India. keshav@ibioinformatics.org.
Amrita Vishwa Vidyapeetham · INYenepoya University · INArmed Forces Medical College · INCommand Hospital Air Force · INManipal Academy of Higher Education · INNational Institute of Mental Health and Neurosciences · INUniversity of Mons · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Macrophage migration inhibitory factor (MIF) is a glycosylated multi-functional protein that acts as an enzyme as well as a cytokine. MIF mediates its actions through a cell surface class II major histocompatibility chaperone, CD74 and co-receptors such as CD44, CXCR2, CXCR4 or CXCR7. MIF has been implicated in the pathogenesis of several acute and chronic inflammatory diseases. Although MIF is a molecule of biomedical importance, a public resource of MIF signaling pathway is currently lacking. In view of this, we carried out detailed data mining and documentation of the signaling events pertaining to MIF from published literature and developed an integrated reaction map of MIF signaling. This resulted in the cataloguing of 68 molecules belonging to MIF signaling pathway, which includes 24 protein-protein interactions, 44 post-translational modifications, 11 protein translocation events and 8 activation/inhibition events. In addition, 65 gene regulation events at the mRNA levels induced by MIF signaling have also been catalogued. This signaling pathway has been integrated into NetPath ( http://www.netpath.org ), a freely available human signaling pathway resource developed previously by our group. The MIF pathway data is freely available online in various community standard data exchange formats. We expect that data on signaling events and a detailed signaling map of MIF will provide the scientific community with an improved platform to facilitate further molecular as well as biomedical investigations on MIF.

Indexed as

Immune responseInflammationNetSlimPost-translational modificationsPro-inflammatory cytokineProtein-protein interactions

Identifiers

PMID27139435
PMCPMC4882307
OpenAlexW2345489314

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.