Evidence map›Paper›PMID 27137933›Full record

ArticleThe Journal of biological chemistry2016

Interferon Regulatory Factor 8 (IRF8) Impairs Induction of Interferon Induced with Tetratricopeptide Repeat Motif (IFIT) Gene Family Members.

Christine L White, Patricia M Kessler, Benjamin K Dickerman, Keiko Ozato, Ganes C Sen

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.3field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Transcriptional control of interferon-stimulated genes.The Journal of biological chemistry · 2024
    Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Christine L WhiteFrom the Department of Molecular Genetics, Lerner Research Institute, Cleveland Clinic, Cleveland, Ohio 44195, christine.white@hudson.org.au.
Patricia M KesslerFrom the Department of Molecular Genetics, Lerner Research Institute, Cleveland Clinic, Cleveland, Ohio 44195.
Benjamin K DickermanFrom the Department of Molecular Genetics, Lerner Research Institute, Cleveland Clinic, Cleveland, Ohio 44195, the Graduate Program in Molecular Virology, Case Western Reserve University, Cleveland, Ohio 44106, and.
Keiko Ozatothe Program in Genomics of Differentiation, NICHD, National Institutes of Health, Bethesda, Maryland 20892.
Ganes C SenFrom the Department of Molecular Genetics, Lerner Research Institute, Cleveland Clinic, Cleveland, Ohio 44195, the Graduate Program in Molecular Virology, Case Western Reserve University, Cleveland, Ohio 44106, and seng@ccf.org.
Case Western Reserve University · USCleveland Clinic Lerner College of Medicine · USEunice Kennedy Shriver National Institute of Child Health and Human Development · US

Funding

TELOMERASE INACTIVATION BY RNASE L SIGNALS CELL DEATHP01CA062220 · NCI · CLEVELAND CLINIC LERNER COM-CWRU · PI LI, XIAOXIA, STARK, GEORGE ROBERT · 1994 to 2020
$35.6M
Gene Regulation In The Immune SystemZIAHD001310 · NICHD · EUNICE KENNEDY SHRIVER NATIONAL INSTITUTE OF CHILD HEALTH & HUMAN DEVELOPMENT · PI OZATO, KEIKO · 2009 to 2025
$15.0M
ANTIVIRAL ACTIONS OF INTERFERONSR01CA068782 · NCI · CLEVELAND CLINIC LERNER COM-CWRU · PI SEN, GANES C. · 1995 to 2020
$7.6M
Cellular Determinants of Apoptosis in Virus-Infected CellsR01AI073303 · NIAID · CLEVELAND CLINIC LERNER COM-CWRU · PI SEN, GANES C. · 2008 to 2018
$3.5M
Gene Regulation In The Immune SystemZIHHD001310 · NICHD · EUNICE KENNEDY SHRIVER NATIONAL INSTITUTE OF CHILD HEALTH & HUMAN DEVELOPMENT · PI OZATO, KEIKO · 2017 to 2017
$651k
Cellular determinants of apoptosis in virus-infected cellsR56AI073303 · NIAID · CLEVELAND CLINIC LERNER COM-CWRU · PI SEN, GANES C. · 2013 to 2013
$372k
NCI NIH HHS P01 CA062220NCI NIH HHS R01 CA068782NIAID NIH HHS R01 AI073303NIAID NIH HHS R56 AI073303
6 · The paper itself

Abstract

The chromosomally clustered interferon-induced with tetratricopeptide repeat motif (IFIT) gene family members share structural features at the gene and protein levels. Despite these similarities, different IFIT genes have distinct inducer- and cell type-specific induction patterns. Here, we investigated the mechanism for the observed differential induction of the mouse Ifit1, Ifit2, and Ifit3 genes in B cells and demonstrated that the repressive effect of the transcription factor interferon regulatory factor 8 (IRF8), which is highly expressed in B cells, played an essential role in this regulation. Although IRF8 could impair induction of all three IFIT genes following stimulation of retinoic acid-inducible gene I (RIG-I), it could selectively impair the induction of the Ifit1 gene following IFN stimulation. The above properties could be imparted to IRF8-non-expressing cells by ectopic expression of the protein. Induction of reporter genes, driven by truncated Ifit1 promoters, identified the regions that mediate the repression, and a chromatin immunoprecipitation assay revealed that more IRF8 bound to the IFN-stimulated response element of the Ifit1 gene than to those of the Ifit2 and the Ifit3 genes. Mutational analyses of IRF8 showed that its ability to bind DNA, interact with other proteins, and undergo sumoylation were all necessary to selectively repress Ifit1 gene induction in response to IFN. Our study revealed a new role for IRFs in differentially regulating the induction patterns of closely related IFN-stimulated genes that are located adjacent to one another in the mouse genome.

Indexed as

Adaptor Proteins, Signal TransducingAnimalsApoptosis Regulatory ProteinsB-LymphocytesCarrier ProteinsInterferon Regulatory Factor-8Interferon Regulatory FactorsIntracellular Signaling Peptides and ProteinsMiceMultigene FamilyMutationProteinsResponse ElementsRNA-Binding ProteinsAdaptor Proteins, Signal TransducingApoptosis Regulatory ProteinsCarrier ProteinsIfit1 protein, mouseIfit2 protein, mouseIfit3 protein, mouseInterferon Regulatory Factor-8Interferon Regulatory FactorsIntracellular Signaling Peptides and ProteinsProteinsRNA-Binding Proteinsgene regulationinterferoninterferon regulatory factor (IRF)promotertranscription regulation

Identifiers

PMID27137933
PMCPMC4919440
OpenAlexW2346160085

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.