Evidence map›Paper›PMID 27137401›Full record

ArticlePlants (Basel, Switzerland)2013

The Clubroot Pathogen (Plasmodiophora brassicae) Influences Auxin Signaling to Regulate Auxin Homeostasis in Arabidopsis.

Linda Jahn, Stefanie Mucha, Sabine Bergmann, Cornelia Horn, Paul Staswick, Bianka Steffens, Johannes Siemens, Jutta Ludwig-Müller

Open access · goldAbstract read
In one paragraph

Article in Plants (Basel, Switzerland), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
4.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 69 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. What Can We Learn from -Omics Approaches to Understand Clubroot Disease?International journal of molecular sciences · 2022
    Review
  8. Identification ofFrontiers in plant science · 2022
    Article
  9. Article
  10. A Proteome-Level Investigation IntoFrontiers in plant science · 2022
    Article
  11. Article
  12. Review
  13. Indole-3-Acetic Acid Is Synthesized by the EndophyteInternational journal of molecular sciences · 2021
    Article
  14. Candidate Effectors ofFrontiers in microbiology · 2021
    Article
  15. Article
  16. Article
  17. Review
  18. Response ofFrontiers in plant science · 2020
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Linda JahnInstitut für Botanik, Technische Universität Dresden, 01062 Dresden, Germany. Linda.Jahn@mailbox.tu-dresden.de.
Stefanie MuchaInstitut für Botanik, Technische Universität Dresden, 01062 Dresden, Germany. Mucha.Stefanie@web.de.
Sabine BergmannInstitut für Botanik, Technische Universität Dresden, 01062 Dresden, Germany. bine.schu@web.de.
Cornelia HornInstitut für Botanik, Technische Universität Dresden, 01062 Dresden, Germany. Cornelia.Horn@mailbox.tu-dresden.de.
Paul StaswickDepartment of Agronomy and Horticulture, University of Nebraska, 379 Keim, Lincoln, NE 68521 USA. pstaswick1@unl.edu.
Bianka SteffensBotanisches Institut, Universität Kiel, Am Botanischen Garten 5, 24118 Kiel, Germany. bsteffens@bot.uni-kiel.de.
Johannes SiemensInstitut für Botanik, Technische Universität Dresden, 01062 Dresden, Germany. Johannes.Siemens@hu-berlin.de.
Jutta Ludwig-MüllerInstitut für Botanik, Technische Universität Dresden, 01062 Dresden, Germany. Ludwig-Mueller@tu-dresden.de.
TU Dresden · DEKiel University · DEUniversity of Nebraska–Lincoln · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The clubroot disease, caused by the obligate biotrophic protist Plasmodiophora brassicae, affects cruciferous crops worldwide. It is characterized by root swellings as symptoms, which are dependent on the alteration of auxin and cytokinin metabolism. Here, we describe that two different classes of auxin receptors, the TIR family and the auxin binding protein 1 (ABP1) in Arabidopsis thaliana are transcriptionally upregulated upon gall formation. Mutations in the TIR family resulted in more susceptible reactions to the root pathogen. As target genes for the different pathways we have investigated the transcriptional regulation of selected transcriptional repressors (Aux/IAA) and transcription factors (ARF). As the TIR pathway controls auxin homeostasis via the upregulation of some auxin conjugate synthetases (GH3), the expression of selected GH3 genes was also investigated, showing in most cases upregulation. A double gh3 mutant showed also slightly higher susceptibility to P. brassicae infection, while all tested single mutants did not show any alteration in the clubroot phenotype. As targets for the ABP1-induced cell elongation the effect of potassium channel blockers on clubroot formation was investigated. Treatment with tetraethylammonium (TEA) resulted in less severe clubroot symptoms. This research provides evidence for the involvement of two auxin signaling pathways in Arabidopsis needed for the establishment of the root galls by P. brassicae.

Indexed as

ABP1Arabidopsis thalianaauxin homeostasisauxin receptorsclubroot diseaseGH3 proteinsPlasmodiophora brassicaepotassium channel inhibitorstetraethylammoniumTIR1

Identifiers

PMID27137401
PMCPMC4844388
OpenAlexW2044420071

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.