Evidence map›Paper›PMID 27136578›Full record

ArticleViruses2016

Characterization of a Novel Polerovirus Infecting Maize in China.

Sha Chen, Guangzhuang Jiang, Jianxiang Wu, Yong Liu, Yajuan Qian, Xueping Zhou

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
17.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 73 citations in OpenAlex.

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  4. Molecular Variation and Genomic Function of Citrus Vein Enation Virus.International journal of molecular sciences · 2022
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  13. Key Amino Acids forFrontiers in microbiology · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Sha ChenInstitute of Biotechnology, Zhejiang University, Hangzhou 310058, China. sophiachen920@126.com.
Guangzhuang JiangInstitute of Biotechnology, Zhejiang University, Hangzhou 310058, China. jgzzero@163.com.
Jianxiang WuInstitute of Biotechnology, Zhejiang University, Hangzhou 310058, China. wujx@zju.edu.cn.
Yong LiuKey Laboratory of Pest Management of Horticultural Crop of Hunan Province, Hunan Plant Protection Institute, Hunan Academy of Agricultural Science, Changsha 410125, China. haoasliu@163.com.
Yajuan QianInstitute of Biotechnology, Zhejiang University, Hangzhou 310058, China. yjqian@zju.edu.cn.
Xueping ZhouInstitute of Biotechnology, Zhejiang University, Hangzhou 310058, China. zzhou@zju.edu.cn.
Zhejiang University · CNChinese Academy of Agricultural Sciences · CNHunan Academy of Agricultural Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A novel virus, tentatively named Maize Yellow Mosaic Virus (MaYMV), was identified from the field-grown maize plants showing yellow mosaic symptoms on the leaves collected from the Yunnan Province of China by the deep sequencing of small RNAs. The complete 5642 nucleotide (nt)-long genome of the MaYMV shared the highest nucleotide sequence identity (73%) to Maize Yellow Dwarf Virus-RMV. Sequence comparisons and phylogenetic analyses suggested that MaYMV represents a new member of the genus Polerovirus in the family Luteoviridae. Furthermore, the P0 protein encoded by MaYMV was demonstrated to inhibit both local and systemic RNA silencing by co-infiltration assays using transgenic Nicotiana benthamiana line 16c carrying the GFP reporter gene, which further supported the identification of a new polerovirus. The biologically-active cDNA clone of MaYMV was generated by inserting the full-length cDNA of MaYMV into the binary vector pCB301. RT-PCR and Northern blot analyses showed that this clone was systemically infectious upon agro-inoculation into N. benthamiana. Subsequently, 13 different isolates of MaYMV from field-grown maize plants in different geographical locations of Yunnan and Guizhou provinces of China were sequenced. Analyses of their molecular variation indicate that the 3' half of P3-P5 read-through protein coding region was the most variable, whereas the coat protein- (CP-) and movement protein- (MP-)coding regions were the most conserved.

Indexed as

Genetic VariationPhylogenyChinaCloning, MolecularCluster AnalysisGene SilencingGenome, ViralHigh-Throughput Nucleotide SequencingHost-Pathogen InteractionsLuteoviridaeNicotianaPlant DiseasesPlant LeavesReverse GeneticsSequence Analysis, DNASequence Homologydeep sequencinginfectious cloneMaize yellow mosaic virusmolecular variationsRNAsuppressor

Identifiers

PMID27136578
PMCPMC4885075
OpenAlexW2343267425

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.