Evidence map›Paper›PMID 27135974›Full record

ArticleNature methods2016

An unbiased metric of antiproliferative drug effect in vitro.

Leonard A Harris, Peter L Frick, Shawn P Garbett, Keisha N Hardeman, B Bishal Paudel, Carlos F Lopez, Vito Quaranta, Darren R Tyson

Abstract read
In one paragraph

Article in Nature methods, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 64 papers.

0numbers the graph read from it
0cells of the map it votes in
64citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

64 citing papers in PubMed.

  1. Article
  2. Review
  3. Dual Inhibition of TRIP13 and Aurora A Induces Mitotic DNA Damage and Concurrent Pyroptotic-Apoptotic Cell Death in Rb-Deficient Cancer Cells.Clinical cancer research : an official journal of the American Association for Cancer Research · 2026
    Article
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  5. Article
  6. Evolutionary antifragile therapy.bioRxiv : the preprint server for biology · 2025
    Article
  7. Article
  8. Systems Biology of the Cancer Cell.Annual review of biomedical engineering · 2025
    Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

4 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Leonard A HarrisDepartment of Cancer Biology, Vanderbilt University School of Medicine, Nashville, Tennessee, USA.
Peter L FrickDepartment of Cancer Biology, Vanderbilt University School of Medicine, Nashville, Tennessee, USA.
Shawn P GarbettDepartment of Cancer Biology, Vanderbilt University School of Medicine, Nashville, Tennessee, USA.
Keisha N HardemanDepartment of Cancer Biology, Vanderbilt University School of Medicine, Nashville, Tennessee, USA.
B Bishal PaudelDepartment of Cancer Biology, Vanderbilt University School of Medicine, Nashville, Tennessee, USA.
Carlos F LopezDepartment of Cancer Biology, Vanderbilt University School of Medicine, Nashville, Tennessee, USA.
Vito QuarantaDepartment of Cancer Biology, Vanderbilt University School of Medicine, Nashville, Tennessee, USA.
Darren R TysonDepartment of Cancer Biology, Vanderbilt University School of Medicine, Nashville, Tennessee, USA.

Funding

TISSUE CoreP50CA098131 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI PARK, BEN HO, PIETENPOL, JENNIFER A · 2003 to 2024
$48.7M
The Vanderbilt Institute for Clinical and Translational Research (VICTR)UL1TR000445 · NCATS · VANDERBILT UNIVERSITY MEDICAL CENTER · PI BERNARD, GORDON RAPHAEL · 2012 to 2016
$41.4M
Vanderbilt Biomedical Informatics Training ProgramT15LM007450 · NLM · VANDERBILT UNIVERSITY · PI Jessica S. Ancker, Bradley A. Malin · 2002 to 2026
$19.7M
TrainingU54CA113007 · NCI · VANDERBILT UNIVERSITY · PI QUARANTA, VITO · 2004 to 2014
$19.2M
Integrated Biological Systems Training in OncologyT32CA119925 · NCI · VANDERBILT UNIVERSITY · PI Vivian Gama, William Patrick Tansey · 2008 to 2026
$7.6M
Quantitative Multiscale Imaging to Optimize Cancer Treatment StrategiesR01CA186193 · NCI · VANDERBILT UNIVERSITY · PI QUARANTA, VITO, RERICHA, ERIN C · 2014 to 2019
$3.1M
Image Driven Multi-Scale Modeling to Predict Treatment Response in Breast CancerU01CA174706 · NCI · VANDERBILT UNIVERSITY · PI QUARANTA, VITO, YANKEELOV, THOMAS E · 2013 to 2018
$2.5M
GPU-Accelerated Parallel Computer for Drug Discovery ApplicationsS10OD020154 · OD · VANDERBILT UNIVERSITY · PI SMITH, JARROD ANSON · 2015 to 2015
$225k
Targeting Altered Redox Metabolism in Lapatinib-resistant Breast CancerF31CA174365 · NCI · VANDERBILT UNIVERSITY · PI HARDEMAN, KEISHA NICOLE · 2012 to 2016
$155k
NCATS NIH HHS UL1 TR000445NCI NIH HHS F31 CA174365NCI NIH HHS P50 CA098131NCI NIH HHS R01 CA186193NCI NIH HHS T32 CA119925NCI NIH HHS U01 CA174706NCI NIH HHS U54 CA113007NLM NIH HHS T15 LM007450
6 · The paper itself

Abstract

In vitro cell proliferation assays are widely used in pharmacology, molecular biology, and drug discovery. Using theoretical modeling and experimentation, we show that current metrics of antiproliferative small molecule effect suffer from time-dependent bias, leading to inaccurate assessments of parameters such as drug potency and efficacy. We propose the drug-induced proliferation (DIP) rate, the slope of the line on a plot of cell population doublings versus time, as an alternative, time-independent metric.

Indexed as

Models, TheoreticalCell Line, TumorCell ProliferationComputer SimulationDose-Response Relationship, DrugDrug DiscoveryHumansMicroscopy, FluorescenceMolecular BiologySensitivity and SpecificitySmall Molecule LibrariesTime FactorsSmall Molecule Libraries

Identifiers

PMID27135974
PMCPMC4887341

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.