Evidence map›Paper›PMID 27135973›Full record

ArticleNature methods2016

Oxidative release of natural glycans for functional glycomics.

Xuezheng Song, Hong Ju, Yi Lasanajak, Matthew R Kudelka, David F Smith, Richard D Cummings

Open access · greenAbstract read
In one paragraph

Article in Nature methods, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 89 papers.

0numbers the graph read from it
0cells of the map it votes in
89citing papers in PubMed
13.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

89 citing papers in PubMed, 189 citations in OpenAlex.

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  9. Analysis ofACS omega · 2025
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  14. Review
  15. [Applications of chromatography in glycomics].Se pu = Chinese journal of chromatography · 2024
    Review
  16. Labeling of Mucin-TypeACS measurement science au · 2024
    Article
  17. Article
  18. Article
  19. Article
  20. Article

29 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Xuezheng SongDepartment of Biochemistry, Emory University School of Medicine, Atlanta, Georgia, USA.
Hong JuDepartment of Biochemistry, Emory University School of Medicine, Atlanta, Georgia, USA.
Yi LasanajakDepartment of Biochemistry, Emory University School of Medicine, Atlanta, Georgia, USA.
Matthew R KudelkaDepartment of Biochemistry, Emory University School of Medicine, Atlanta, Georgia, USA.
David F SmithDepartment of Biochemistry, Emory University School of Medicine, Atlanta, Georgia, USA.
Richard D CummingsDepartment of Surgery, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, Massachusetts, USA.
Emory University · USHarvard University · US

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM008169 · NIGMS · EMORY UNIVERSITY · PI GROSS, ROBERT E · 1987 to 2021
$20.3M
Overall Priority Score P41GM103694 · NIGMS · EMORY UNIVERSITY · PI CUMMINGS, RICHARD D · 2013 to 2018
$6.9M
Shotgun Glycomics: Linking Glycan Structure and FunctionR01GM085448 · NIGMS · EMORY UNIVERSITY · PI SMITH, DAVID FLETCHER · 2008 to 2011
$2.3M
Facile Chemical Methods for Reverse Synthesis and Large Scale Production of Biomedically Relevant Glycan LibrariesU01GM116254 · NIGMS · EMORY UNIVERSITY · PI REINHOLD, VERNON NYE, SONG, XUEZHENG · 2015 to 2017
$1.6M
NIAID NIH HHS HHSN272201400004CNIGMS NIH HHS P41 GM103694NIGMS NIH HHS R01 GM085448NIGMS NIH HHS T32 GM008169NIGMS NIH HHS U01 GM116254
6 · The paper itself

Abstract

Glycans have essential roles in biology and the etiology of many diseases. A major hurdle in studying glycans through functional glycomics is the lack of methods to release glycans from diverse types of biological samples. Here we describe an oxidative strategy using household bleach to release all types of free reducing N-glycans and O-glycan-acids from glycoproteins, and glycan nitriles from glycosphingolipids. Released glycans are directly useful in glycomic analyses and can be derivatized fluorescently for functional glycomics. This chemical method overcomes the limitations in glycan generation and promotes archiving and characterization of human and animal glycomes and their functions.

Indexed as

AnimalsChickensChromatography, High Pressure LiquidChromatography, Thin LayerEggsFemaleGastrointestinal TractGlycomicsGlycoproteinsGlycosphingolipidsMice, Inbred C57BLOxidantsOxidation-ReductionPlant LectinsPolysaccharidesSodium HypochloriteGlycoproteinsGlycosphingolipidsOxidantsPlant LectinsPolysaccharidesSodium Hypochlorite

Identifiers

PMID27135973
PMCPMC4887297
OpenAlexW2344851944

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.