Evidence map›Paper›PMID 27133025›Full record

ArticleStructure (London, England : 1993)2016

The Structural Basis for Class II Cytokine Receptor Recognition by JAK1.

Ryan Ferrao, Heidi J A Wallweber, Hoangdung Ho, Christine Tam, Yvonne Franke, John Quinn, Patrick J Lupardus

Open access · bronzeAbstract read
In one paragraph

Article in Structure (London, England : 1993), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
4.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 79 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Mechanisms of Differential Signal Transduction by IFNLR1 Variants.bioRxiv : the preprint server for biology · 2025
    Article
  5. Function of Interferon Lambda Receptor 1 Variants in Stem Cell-Derived Hepatocytes with Abrogated EndogenousJournal of interferon & cytokine research : the official journal of the International Society for Interferon and Cytokine Research · 2025
    Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Review
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
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  20. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Ryan FerraoDepartment of Structural Biology, Genentech, Inc., 1 DNA Way, South San Francisco, CA 94080, USA.
Heidi J A WallweberDepartment of Structural Biology, Genentech, Inc., 1 DNA Way, South San Francisco, CA 94080, USA.
Hoangdung HoDepartment of Structural Biology, Genentech, Inc., 1 DNA Way, South San Francisco, CA 94080, USA.
Christine TamDepartment of Structural Biology, Genentech, Inc., 1 DNA Way, South San Francisco, CA 94080, USA.
Yvonne FrankeDepartment of Structural Biology, Genentech, Inc., 1 DNA Way, South San Francisco, CA 94080, USA.
John QuinnDepartment of Biochemical and Cellular Pharmacology, Genentech, Inc., 1 DNA Way, South San Francisco, CA 94080, USA.
Patrick J LupardusDepartment of Structural Biology, Genentech, Inc., 1 DNA Way, South San Francisco, CA 94080, USA. Electronic address: lupardus.patrick@gene.com.
Gene Therapy Laboratory · FR

Funding

X-ray Absorption Spectroscopy (XAS) pp.711-759P41GM103393 · NIGMS · STANFORD UNIVERSITY · PI HODGSON, KEITH O · 2012 to 2019
$30.6M
NIGMS NIH HHS P41 GM103393
6 · The paper itself

Abstract

JAK1 is a member of the Janus kinase (JAK) family of non-receptor tyrosine kinases that are activated in response to cytokines and interferons. Here, we present two crystal structures of the human JAK1 FERM and SH2 domains bound to peptides derived from the class II cytokine receptors IFN-λ receptor 1 and IL-10 receptor 1 (IFNLR1 and IL10RA). These structures reveal an interaction site in the JAK1 FERM that accommodates the so-called "box1" membrane-proximal receptor peptide motif. Biophysical analysis of the JAK1-IFNLR1 interaction indicates that the receptor box1 is the primary driver of the JAK1 interaction, and identifies residues conserved among class II receptors as important for binding. In addition, we demonstrate that a second "box2" receptor motif further stabilizes the JAK1-IFNLR1 complex. Together, these data identify a conserved JAK binding site for receptor peptides and elucidate the mechanism by which class II cytokine receptors interact with JAK1.

Indexed as

Amino Acid MotifsBinding SitesCrystallography, X-RayHumansInterleukin-10 Receptor alpha SubunitJanus Kinase 1Models, MolecularProtein BindingProtein ConformationProtein DomainsReceptors, CytokineReceptors, InterferonIFNLR1 protein, humanInterleukin-10 Receptor alpha SubunitJAK1 protein, humanJanus Kinase 1Receptors, CytokineReceptors, Interferon

Identifiers

PMID27133025
PMCPMC4899269
OpenAlexW2343456853

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.