Evidence map›Paper›PMID 27131125›Full record

ArticleCarbohydrate research2016

Glycan specificity of neuraminidases determined in microarray format.

Janet E McCombs, Jason P Diaz, Kevin J Luebke, Jennifer J Kohler

Open access · greenAbstract read
In one paragraph

Article in Carbohydrate research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.7field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 12 citations in OpenAlex.

  1. Review
  2. Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  3. Glycan Array Technology.Advances in biochemical engineering/biotechnology · 2021
    Article
  4. Review
  5. Inhibition of sialidase activity as a therapeutic approach.Drug design, development and therapy · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Janet E McCombsDepartment of Biochemistry, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Jason P DiazDivision of Cardiology, Department of Internal Medicine, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Kevin J LuebkeDivision of Cardiology, Department of Internal Medicine, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Jennifer J KohlerDepartment of Biochemistry, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA. Electronic address: jennifer.kohler@utsouthwestern.edu.
The University of Texas Southwestern Medical Center · US

Funding

Study of sialoside function using photocrosslinking sialic acidR01GM090271 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI KOHLER, JENNIFER J · 2009 to 2021
$4.4M
Ligands for a Hairpin Precursor of a MicroRNA Linked to Cancer and Heart DiseaseR01GM088842 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI LUEBKE, KEVIN J · 2010 to 2013
$1.2M
NIGMS NIH HHS R01 GM088842NIGMS NIH HHS R01 GM090271
6 · The paper itself

Abstract

Neuraminidases hydrolytically remove sialic acids from glycoconjugates. Neuraminidases are produced by both humans and their pathogens, and function in normal physiology and in pathological events. Identification of neuraminidase substrates is needed to reveal their mechanism of action, but high-throughput methods to determine glycan specificity of neuraminidases are limited. Here we use two glycan labeling reactions to monitor neuraminidase activity toward glycan substrates. While both periodate oxidation and aniline-catalyzed oxime ligation (PAL) and galactose oxidase and aniline-catalyzed oxime ligation (GAL) can be used to monitor neuraminidase activity toward glycans in microtiter plates, only GAL accurately measured neuraminidase activity toward glycans displayed on a commercial glass slide microarray. Using GAL, we confirm known linkage specificities of three pneumococcal neuraminidases and obtain new information about underlying glycan specificity.

Indexed as

Bacterial ProteinsHumansMicroarray AnalysisNeuraminidasePolysaccharidesRecombinant ProteinsStaining and LabelingStreptococcus pneumoniaeSubstrate SpecificityBacterial ProteinsNeuraminidasePolysaccharidesRecombinant ProteinsChemoenzymatic labelingMicroarrayNeuraminidaseSialic acids

Identifiers

PMID27131125
PMCPMC4885666
OpenAlexW2334692665

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.